Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00588 ATGACGACCTTGTCGTCGTCGGAAACGAGGTCGCCGTTTCCGCTGCTTTTCAGGAGACACTCGAGCGGCGAGGTAAGAAACTTAACGTCGGTTTCGAGTAGTCTCTTGCCGGCGTTCGGAACAGTCGTAGATGAAGGATATTTACACCTCAGAAAATTTATCATTGTTCCCTACGATCGTAGATATCGGTTATGGCAGACCTTTCTGGTTGTACTAGTGGTGTACTCAGCATGGGCATCTCCTTTCGAACTAGCCTTCAAAAAAGTGGCAACTGGGTCGCTCCTGCATGTTGATTTAGTTGTCGATGGCTTCTTTGCCATTGATATAGTCTTGACTTTCTTTGTGGCATACTTGGATAAATCAACCTATCTCCTCGTTGATGATCATAAGAAGATAGCAAGAAGATACCTTACTAGCCTGCGGTTTCTTATGGACGTAGCCTCAACTCTTCCATATCAAATAATATACAGAATTTTCACAGGAGACTTGCACAATGGCGAGACCTTTGGTTTCCTTAACTTTCTCCGCTTTTGGCGACTCAGGCGTGTTAGTCAGCTCTTTGCTAGGCTAGAGAAAGATACGCGCTTCAGCTACTTTTGGACAAGATATATCAAACTAATTTGCGTGACGTTGTTTGTTGTGCATGGAGCAGGGTGCTTTTACTTTTGGATGGCAACTCGTTACAAAGATTCAGCAAACACGTGGATTGGAGTGGAAGTCCCTGACTTTGAGCAGCAAAGCATCTGGATCTGCTACACTTACTCCATTTACTGGTCTATTGTCACCCTCGCTACAGTTGGCTATGGCGACCTGCACGCAGTCAATATGGGGGAGAAGATATTTAGCATCTTCTACATGCTCTTCAACATCAGCCTCACGGCTTATTTGATTGGCAACATGACAAATCTAATTGTTCACAGTGCTGTTCGAACCTTTGCCATGAGAGATGCAATCCATGAGATACTAAGATATGCAAGCAAGAGTAGGCTACCAGATGGGTTAAAAGCCCAAATGCTGGCACACATGCAGCTCAAGTTCAAGACAGCAGAACTGCAGCAAGCAGAGGTGCTTGGGGACTTGCCTAAAGCAATAAGATCAAGCATTGCTCAGCACCTGTTTCGAAAAACAGTGGAAGATGCATACCTATTCAAGGGAGTCTCTGAAGATCTGATTGTGCAATCGGTAGCAGAGATGAAAGCTGAATATTTTCCACCCAAAGTCGATATTATATTGCAAAACGAGATACCCACAGATTTCTACATTTTGGTATCTGGATCAGTGGAAATTCGTGCTTATGCATTACAAAGTGATATACTTGTATGTTTTTGCGCTGAACTGAAAGTTCTTTTACAGATTCTAACAAGACTAGGACCCGGAGACATGGCAGGAGAAATTGGGGTACTGTTTAATATTCCACAACCTTTCACAGTAAGAACAAAGAGGCTTTCTCAGGTTGTGCGCATCGGTCATCATAGTATCAAGCAGATGATACAACCACACAGTGATGGGAAGATAATTATCTCTAACTTCATACAGTATTTGAAGGGCTTGAAACAAGAGTTGCTTGATGAAATACCATATCTCAAGGACTTGCTCGGTGACTTGAATATAGAGGTTTGTTTTTTATTCAAATTTCTGGCAACAAACTTTGTATGTGACAATTGTAACTTACAAAACATCTTTAAGAAGCCATTTCCTCGATCAACACTTCCCAAGAGGGTGATAATTCACGGACATCATCCGGATGAAGATACCAATAAAGATGACAGCATGATAAAACTTATACTTCTGCCAAATTCAGTAGAAGAACTCATTGTATTAGCAGAGAAGAAGTTTGGCAAAAGAGGAAAAACAATTCTAATGGCTGATGGCTCTGAAGTAGAGGACTTGAATGCTTTAAGAGAGAGCGATCACTTATTTATTGTATGA 1929 41.94 MTTLSSSETRSPFPLLFRRHSSGEVRNLTSVSSSLLPAFGTVVDEGYLHLRKFIIVPYDRRYRLWQTFLVVLVVYSAWASPFELAFKKVATGSLLHVDLVVDGFFAIDIVLTFFVAYLDKSTYLLVDDHKKIARRYLTSLRFLMDVASTLPYQIIYRIFTGDLHNGETFGFLNFLRFWRLRRVSQLFARLEKDTRFSYFWTRYIKLICVTLFVVHGAGCFYFWMATRYKDSANTWIGVEVPDFEQQSIWICYTYSIYWSIVTLATVGYGDLHAVNMGEKIFSIFYMLFNISLTAYLIGNMTNLIVHSAVRTFAMRDAIHEILRYASKSRLPDGLKAQMLAHMQLKFKTAELQQAEVLGDLPKAIRSSIAQHLFRKTVEDAYLFKGVSEDLIVQSVAEMKAEYFPPKVDIILQNEIPTDFYILVSGSVEIRAYALQSDILVCFCAELKVLLQILTRLGPGDMAGEIGVLFNIPQPFTVRTKRLSQVVRIGHHSIKQMIQPHSDGKIIISNFIQYLKGLKQELLDEIPYLKDLLGDLNIEVCFLFKFLATNFVCDNCNLQNIFKKPFPRSTLPKRVIIHGHHPDEDTNKDDSMIKLILLPNSVEELIVLAEKKFGKRGKTILMADGSEVEDLNALRESDHLFIV 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3817067 3823429 - Bpe008430.3 Bpe02g00588 98737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00588 642 SMART cnmp_10 382 512 IPR000595 -
Bpe02g00588 642 PANTHER POTASSIUM CHANNEL AKT1 64 641 IPR045319 GO:0005249|GO:0006813
Bpe02g00588 642 Pfam Cyclic nucleotide-binding domain 402 498 IPR000595 -
Bpe02g00588 642 PANTHER POTASSIUM CHANNEL AKT1 4 63 IPR045319 GO:0005249|GO:0006813
Bpe02g00588 642 PRINTS EAG/ELK/ERG potassium channel family signature 296 305 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe02g00588 642 PRINTS EAG/ELK/ERG potassium channel family signature 278 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe02g00588 642 PRINTS EAG/ELK/ERG potassium channel family signature 252 269 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe02g00588 642 PRINTS EAG/ELK/ERG potassium channel family signature 98 108 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe02g00588 642 PRINTS EAG/ELK/ERG potassium channel family signature 109 118 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe02g00588 642 CDD CAP_ED 382 502 IPR000595 -
Bpe02g00588 642 Pfam Ion transport protein 63 308 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe02g00588 642 Gene3D - 63 306 - -
Bpe02g00588 642 Pfam KHA, dimerisation domain of potassium ion channel 572 641 IPR021789 -
Bpe02g00588 642 SUPERFAMILY cAMP-binding domain-like 311 503 IPR018490 -
Bpe02g00588 642 ProSiteProfiles KHA domain profile. 573 642 IPR021789 -
Bpe02g00588 642 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 4 63 - -
Bpe02g00588 642 Gene3D Jelly Rolls 350 530 IPR014710 -
Bpe02g00588 642 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 64 641 - -
Bpe02g00588 642 SUPERFAMILY Voltage-gated potassium channels 57 305 - -
Bpe02g00588 642 ProSiteProfiles cAMP/cGMP binding motif profile. 382 502 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00588 Bpe-Chr2:3817067 Bpe08g00448 Bpe-Chr8:2841352 5.23E-174 dispersed
Bpe02g00588 Bpe-Chr2:3817067 Bpe01g00497 Bpe-Chr1:3177400 8.60E-176 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00588 K21867 - egr:104437742 898.656