Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00601 ATGCCAGGATTGACCTGCAACGCCTGCAACAGGGTATTCATAGACGACGCGGAGCAAAAGCTCCATTATAAGTCTGAATGGCATCGCTATAATCTTAAGCGAAAGGTAGCTGGTGTTCCTGGTGTGACAGAAGCTTTATTTCTAGCTAGACAATCTGCAGTTTCACAGGAGAACACGAAGTCTAATGAAACCCCAATGTTGTACTCTTGTGGTCTCTGTGGAAAAGGATACAGAAGTTCCAAAGCTCATGCTCAGCATCTTAAATCAAGAAGTCATATAACACGAGCTTCTCAAGGATCCAATGAAGAAGATGAGAAGGCTGTAATCAAGCCACTTGTTCGTAGAACCTCAAATAAGATTCCCCAACAAAAAGGACATAATGAAGAAAGTGATGAGAGTGAAGATGAGTGGGAGGAGGTTGACCCAGATGAAGATTTGGTTAGTGAGGCGACACAGTCCATGACTGTTATGAAGGTGAAAGATGTTGATGGGGAGATGGATGATGATATGGATGACAACGATGACATTGAGGAGTTGGATCCATCGTGCTGCTTTATGTGTGACCAGGACCATGATACTATTGAGAGTTGTATGGTTCACATGCACAAGCAGCATGGTTTCTTCATTCCCGATGTCGATTATTTGAAGGACCCAGCAGGCCTGCTTGCTTATCTTAGCCTGAAGGTGAAGAGGGATTTCATGTGCCTCTACTGCAATGATAGGTGTCTTCCTTTTAATAGCTTGGAAGCAGTTAGGAAGCACATGACAGCAAAAAGCCACTGCAAAGTGCACTATGGTGATGTTGATGAGGATGAGGACGCAGATTTGGAAGACTTCTACGATTACAGTATCAGTTATGTGGATGAGAAAGGCAAAAAACTGGCAGTGGCTGGCGACTCGGCCAACTCTGTAGAACTTGGGAGTGGTGGGTCGGAGCTCATCATTACTAGAACATCTGATCGTGGAATCGTTACCAAATCACTTGGTTCCCGGGAGTTTTTGCGCTATTATCGTCAGAAACCACGCCCTATGAATTACACACCTCTAACTGCTGCATTGGCTTCTAGGTACCGGAGCATGGGATTGGCAACAATACAATCAAGGGAAGGAATGGTGAGGATGAAAGTGATGAAAGCTATGAACAGATCAGGAGTGGAAGCCATGCGCAACAAGATTGGAATGAAGAGCAATGTGATCAGAAACCTGCCTAAGAATGTTCCTTATTGA 1227 44.5 MPGLTCNACNRVFIDDAEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSAVSQENTKSNETPMLYSCGLCGKGYRSSKAHAQHLKSRSHITRASQGSNEEDEKAVIKPLVRRTSNKIPQQKGHNEESDESEDEWEEVDPDEDLVSEATQSMTVMKVKDVDGEMDDDMDDNDDIEELDPSCCFMCDQDHDTIESCMVHMHKQHGFFIPDVDYLKDPAGLLAYLSLKVKRDFMCLYCNDRCLPFNSLEAVRKHMTAKSHCKVHYGDVDEDEDADLEDFYDYSISYVDEKGKKLAVAGDSANSVELGSGGSELIITRTSDRGIVTKSLGSREFLRYYRQKPRPMNYTPLTAALASRYRSMGLATIQSREGMVRMKVMKAMNRSGVEAMRNKIGMKSNVIRNLPKNVPY 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3909874 3912370 - Bpe008442.1 Bpe02g00601 98750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00601 408 SUPERFAMILY beta-beta-alpha zinc fingers 67 100 IPR036236 -
Bpe02g00601 408 PANTHER ZINC FINGER PROTEIN-RELATED 1 408 - -
Bpe02g00601 408 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Bpe02g00601 408 SUPERFAMILY beta-beta-alpha zinc fingers 167 240 IPR036236 -
Bpe02g00601 408 MobiDBLite consensus disorder prediction 97 112 - -
Bpe02g00601 408 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 97 IPR013087 -
Bpe02g00601 408 SUPERFAMILY beta-beta-alpha zinc fingers 3 36 IPR036236 -
Bpe02g00601 408 ProSitePatterns Zinc finger C2H2 type domain signature. 70 92 IPR013087 -
Bpe02g00601 408 PANTHER ZINC FINGER PROTEIN 622 1 408 IPR040025 -
Bpe02g00601 408 MobiDBLite consensus disorder prediction 83 152 - -
Bpe02g00601 408 SMART c2h2final6 4 28 IPR013087 -
Bpe02g00601 408 SMART c2h2final6 68 92 IPR013087 -
Bpe02g00601 408 SMART c2h2final6 233 260 IPR013087 -
Bpe02g00601 408 Pfam C2H2 type zinc-finger (2 copies) 184 283 IPR041661 -
Bpe02g00601 408 MobiDBLite consensus disorder prediction 131 146 - -
Bpe02g00601 408 SMART ZnF_U1_5 1 35 IPR003604 GO:0003676|GO:0008270
Bpe02g00601 408 SMART ZnF_U1_5 65 99 IPR003604 GO:0003676|GO:0008270
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20898 PF12756 zf-C2H2_2 2.30E-25 CL0361 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00601 K14816 - zju:107420801 621.313