Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00606 ATGGCGTTAGATTTCATCCCAGGATTCCCCCCTCACATAGAAGGTCGGCAGATGGCTCTACAGGAAGCTGCCTCTCAAGGCATCAAAAGCATGGAGCGCCTCATCTACGTCCTGTCTCAGAAGCAGCAATCTACTCACTCGGACTGCGCCGATCTCACCGACGCTACCGTTTCGAAGTTCAAAAATGTCATTTCACTTCTCAACCGGACCGGTCATGCGCGGTTCAGGCGCGGTCCGACTTTCTCTCCCTCCTCTTCCGCGTCTCTCTCCCTTCCTCACTCACAGAATTTGAACGTCACACCGGCTACCTTTACTTCTCCGGTGACTGTCTCTACCGCTCCAATTGTTCCTCCGGCGAACTTCGTTCAGCCTCAGCCGCAGAGCATGACCCTTGATTTCACGAAACCTAGTATTTTGAGCTCAAATGTTAAAAGTGCCGAGCTCGAGTTTACTAAAGAGAGCTTCAGCGTCTCCTCCAGTTGCTCGTTCATGTCGTCAAACATCACCGGAGATGGGAGCGTATCGAACGGAAAGCTCGGATCTTCGATCTTCCTGTCCACCGCACCGACAGTCTCCGCCGGGAAGCCGCCTCTCTCAGCGGCGCTCTACAAGAAGAGGTGTAACTCCCACTCCGAAAACGTGTCCGGTTCAACTTCCGCTTCCGGCAAGTGCCACTGCTCCAAAAGAAGGAAGAATCGGGTAAAGAAAACTATCAGAGTGCCGGCGGTGAGTTCAAAGATAGCGGACATTCCGCCGGACGAGTACTCGTGGAGAAAATACGGGCAGAAGCCGATCAAAGGGTCACCGTACCCACGGGGATACTACAAGTGCAGTACAATCAGAGGATGCCCGGCTAGGAAACACGTAGAGAGGGCCACGGATGATCCGAAGATGCTGATCGTAACGTACGAGGGGGAGCACCGTCATGCGCAGGGCGGGATGGAGGAGAACGCCGGTGGGTTGGTGTTCGAGTCAATG 978 54.29 MALDFIPGFPPHIEGRQMALQEAASQGIKSMERLIYVLSQKQQSTHSDCADLTDATVSKFKNVISLLNRTGHARFRRGPTFSPSSSASLSLPHSQNLNVTPATFTSPVTVSTAPIVPPANFVQPQPQSMTLDFTKPSILSSNVKSAELEFTKESFSVSSSCSFMSSNITGDGSVSNGKLGSSIFLSTAPTVSAGKPPLSAALYKKRCNSHSENVSGSTSASGKCHCSKRRKNRVKKTIRVPAVSSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTIRGCPARKHVERATDDPKMLIVTYEGEHRHAQGGMEENAGGLVFESM 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3946555 3948198 - Bpe025087 Bpe02g00606 98755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00606 326 SUPERFAMILY WRKY DNA-binding domain 249 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe02g00606 326 ProSiteProfiles WRKY domain profile. 246 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g00606 326 PANTHER WRKY TRANSCRIPTION FACTOR 17-RELATED 16 325 - -
Bpe02g00606 326 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 325 IPR044810 GO:0003700
Bpe02g00606 326 Pfam Plant zinc cluster domain 204 249 IPR018872 -
Bpe02g00606 326 Gene3D WRKY domain 233 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe02g00606 326 Pfam WRKY DNA -binding domain 253 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g00606 326 SMART WRKY_cls 251 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00439 Bpe-Chr2:2866867 Bpe02g00606 Bpe-Chr2:3946555 1.22E-74 dispersed
Bpe02g00606 Bpe-Chr2:3946555 Bpe04g00173 Bpe-Chr4:1125445 1.52E-75 dispersed
Bpe10g00378 Bpe-Chr10:11362242 Bpe02g00606 Bpe-Chr2:3946555 7.24E-58 dispersed
Bpe14g00545 Bpe-Chr14:4729242 Bpe02g00606 Bpe-Chr2:3946555 4.18E-122 wgd
Bpe02g00606 Bpe-Chr2:3946555 Bpe02g02063 Bpe-Chr2:22147628 3.71E-94 wgd
Bpe02g00606 Bpe-Chr2:3946555 Bpe04g00024 Bpe-Chr4:230847 1.11E-154 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20899 PF03106 WRKY 6.00E-26 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00606 - - csv:101218039 438.728