Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe02g00640 | GAAGAAGAAGAAGAAGAAGAAGAAAAGGAAGAGGAGGAGAAGCATTTTCATGTGCTGGCGGTGGACGATAGTGTTTTGGATAGGAAGATATTGGAGAGACTGCTCAGAATTTCCTCATACAAAGCAGTTACATGCGTTGAATCCGGGGATAAAGCTCTCGAGTATTTGGGTCTGCTCGATAATTTACAAACCCCTTCTCCATCTTCATCTTCTTCTTCTTCTTCTTCTGCTACTTCTTCGCCGTCGTCTTCCCCGCAATTATCAAAGGGATTAAAAGTCAATTTAATCATGACGGACTACTGTATGCCCGGAATGAACGGCTATGATTTACTCAAGCGAATCAAGGGATCGACCTGGAAAGACGTTCCAGTGATAGTGATGTCGTCGGAGAATGTACCTGCAAGAGTCACCATGTGCTTGGAAGGAGGGGCCGAGGAATTTCTGCTCAAGCCTCTCCAACTATCAGATTTGGAGAAGCTTCAACCCCATCTATTGAAGTCTCTAAATCAGCCAACTCCGGTCCAAACCGGAGCTCCGGCCGGGAAGAACAACACAGTGGTCCCAAAGAGCGGCAACAATATTAGTAAAAGAAAGGCCATGTCTCCCAAGCCCTCTGAGCCTGATAGAAGACCCAAAATGAAAGAACTGGCTGTGGTT | 657 | 46.12 | EEEEEEEEKEEEEKHFHVLAVDDSVLDRKILERLLRISSYKAVTCVESGDKALEYLGLLDNLQTPSPSSSSSSSSSATSSPSSSPQLSKGLKVNLIMTDYCMPGMNGYDLLKRIKGSTWKDVPVIVMSSENVPARVTMCLEGGAEEFLLKPLQLSDLEKLQPHLLKSLNQPTPVQTGAPAGKNNTVVPKSGNNISKRKAMSPKPSEPDRRPKMKELAVV | 219 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 4187599 | 4188759 | - | Bpe025092 | Bpe02g00640 | 98789 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe02g00640 | 219 | SUPERFAMILY | CheY-like | 16 | 166 | IPR011006 | - | |
| Bpe02g00640 | 219 | MobiDBLite | consensus disorder prediction | 64 | 88 | - | - | |
| Bpe02g00640 | 219 | MobiDBLite | consensus disorder prediction | 201 | 219 | - | - | |
| Bpe02g00640 | 219 | SMART | REC_2 | 16 | 161 | IPR001789 | GO:0000160 | |
| Bpe02g00640 | 219 | MobiDBLite | consensus disorder prediction | 169 | 199 | - | - | |
| Bpe02g00640 | 219 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 3 | 218 | IPR045279 | GO:0009736 | |
| Bpe02g00640 | 219 | Pfam | Response regulator receiver domain | 80 | 159 | IPR001789 | GO:0000160 | |
| Bpe02g00640 | 219 | MobiDBLite | consensus disorder prediction | 169 | 219 | - | - | |
| Bpe02g00640 | 219 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ORR4 | 3 | 218 | - | - | |
| Bpe02g00640 | 219 | Gene3D | - | 17 | 198 | - | - | |
| Bpe02g00640 | 219 | ProSiteProfiles | Response regulatory domain profile. | 17 | 165 | IPR001789 | GO:0000160 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe02g00640 | Bpe-Chr2:4187599 | Bpe04g01964 | Bpe-Chr4:24500677 | 2.37E-47 | dispersed | |
| Bpe02g00640 | Bpe-Chr2:4187599 | Bpe04g01386 | Bpe-Chr4:20525238 | 6.78E-61 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 20907 | PF00072 | Response_reg | 2.20E-15 | CL0304 | Bpe | TR |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe02g00640 | K14492 | - | rcu:8281066 | 256.914 |