Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00702 ATGGCGACGTACTTCCATGGAAACTCCGAAATCCAACCGCCTGACGGATTGCAAACCCTAATCCTGATGAATCCCGGCTACATCCAGTACTCCGACACACCCCCACCGCCCTCTAGCAACCTAGTATTCTTCAACTCTCAAATCGGGAATCCCCTCTATTTGCCCAATCTGCCTCACGCGCCGTTAACCCAACCTCAGCACTTGGTTGGCTTCCCTCTTTCCGCCGCCACATCCTCAGACCCGAACTCTCTATCCTCGCACAGCCACCATGATATTTCTCCCTTGCATGGCTTCATCCAACGCTCCCAAAATAGGTTTTGTAGCTCAAATGATCATCTCTCGACGGTGGCGCGTGATAGCCCACGCCCTAAGCAAGGACTGTCCCTTACCCTCTCATCTCATGAGCCAGGGTATGGAGTAGTCCGAATTCCATCTGAAGCTCAACAGGAAGTTTCCGGTGAGGATGTACACATTGCACGTGGATCCTCCTCTGCTTCCGGCGTCTCACTTCCGGCCGTGCGGAGCATATCACTGAGCTCGAAGTACTTAAGAGCGGCTCAGGAGCTTCTTGATGAGGTGGCAAACGTCGGCAATAATGGAGTTAAGAAAGACACCTTGAAGAAGGCCGATGACCGACGGACTAAGCAGGAGGAAGAGACATTGGCACTCGCCAGAGACAAAACGAATGGAGTGGAAGACACAGCGAAGACCGGTTCAGAGCTTTCCGCCGCCGAGAAGCAAGAAATTCAGATGAAGAAGGCCCAGTTTATTAACATGCTCGAGGAGGTGGAGCAAAGATACAGACAGTATCATCATCAAACGCAGATTCTGGTTTCCTCTTTCGAACAAGCAGTCGGAATAGGCTCTGCAAGAACTTACACTGCCCTCGCGTTTCTGACCATCTCGAAGCGATTCAGATGCTTAAAAGACACAATCAATGCCCAAATTCAAGTGGCAAACAAGAACTTAGGCAAAGAGGACTGCCATGGCAGCAAACTACGATTTGTAGACCATCAGCTTCATCAACAACGGGCTCTACAGAACTTGGGAATGATTCAGCACAATGCTTGGAGACCCCAGCGAGGATTGCCTGAGAGATCGGTTTCTGTTCTTCGAGCCTGGCTATTCGAACACTTTCTTCACCCGTATCCAAAAGATTCAGACAAGCAAATGCTGGCGAAACAGACAGGACTCACTAGGAGTCAGGTTTCAAATTGGTTCATCAATGCTCGCGTTCGTCTTTGGAAGCCAATGGTAGAAGACATGTACATGGAAGAAATCAAGGAGCGAGAACAGAACTTGTCAGCAGACAAAACCAGCAAGAACAATGAGAACACGACTTCCAAATCCACAACTCCACAGGACAAAAATCATGCAATTGACAACCATCTTCCGAGTTTCAACTCAAAACTGGACGATCTTTCTCATCTTCACCCTCCCCCTGCAATTTCCTTTTCTTCATCGGCTATGTCACTGGAAGCCGTAAATGTTCGAAGCCAATCCGGGTTATGGCTATCTGGGTCATCGGAACTTGATGGAATCACACAAGGAAGTCCAAAGAGACAACGGATTGATGAACCGATGCAGTCCCCAAACAGTATTCCTCTAAACATTGACGCTAAGCCAGGGGAAGCCAATAATGAGCACATTTCAATGAAGTTTAACAGCGAGAGGCATGGCAGAGATGGCTATTCCTTCATTGGAGGTCAAGTTAATTTCATTGGAGGTTTCGAGCAATACCCAATTACAGATATTGAAAGGTTTGACGCTGAGCCATTCACAACAGGATTTTCCGGCAATGGTGTTTCTCTCACTCTTGGTCTTCCCCACTCTGAAAATCTCACGCTATCGGTAGCCAATCATACTTTCCTTCCAAATCAAAACATAAATTTTGGAAGAAACGGTTTCGACCCAATCAACATATCAACACCACACTCTACATCTGCATTCGGGAACATCGATGTACAAAACCGAAAACAACTGGTTGCACAATTGTTGCCCGACTTTGTGACCTGA 2016 47.72 MATYFHGNSEIQPPDGLQTLILMNPGYIQYSDTPPPPSSNLVFFNSQIGNPLYLPNLPHAPLTQPQHLVGFPLSAATSSDPNSLSSHSHHDISPLHGFIQRSQNRFCSSNDHLSTVARDSPRPKQGLSLTLSSHEPGYGVVRIPSEAQQEVSGEDVHIARGSSSASGVSLPAVRSISLSSKYLRAAQELLDEVANVGNNGVKKDTLKKADDRRTKQEEETLALARDKTNGVEDTAKTGSELSAAEKQEIQMKKAQFINMLEEVEQRYRQYHHQTQILVSSFEQAVGIGSARTYTALAFLTISKRFRCLKDTINAQIQVANKNLGKEDCHGSKLRFVDHQLHQQRALQNLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEDMYMEEIKEREQNLSADKTSKNNENTTSKSTTPQDKNHAIDNHLPSFNSKLDDLSHLHPPPAISFSSSAMSLEAVNVRSQSGLWLSGSSELDGITQGSPKRQRIDEPMQSPNSIPLNIDAKPGEANNEHISMKFNSERHGRDGYSFIGGQVNFIGGFEQYPITDIERFDAEPFTTGFSGNGVSLTLGLPHSENLTLSVANHTFLPNQNINFGRNGFDPINISTPHSTSAFGNIDVQNRKQLVAQLLPDFVT 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4780476 4782811 - Bpe008541.1 Bpe02g00702 98851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00702 671 Coils Coil 246 266 - -
Bpe02g00702 671 MobiDBLite consensus disorder prediction 438 464 - -
Bpe02g00702 671 CDD homeodomain 357 418 IPR001356 GO:0003677
Bpe02g00702 671 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 6 636 - -
Bpe02g00702 671 MobiDBLite consensus disorder prediction 113 135 - -
Bpe02g00702 671 MobiDBLite consensus disorder prediction 508 533 - -
Bpe02g00702 671 Gene3D - 353 431 - -
Bpe02g00702 671 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 6 636 - -
Bpe02g00702 671 MobiDBLite consensus disorder prediction 431 475 - -
Bpe02g00702 671 SMART prehox3 170 314 IPR006563 -
Bpe02g00702 671 ProSiteProfiles 'Homeobox' domain profile. 354 417 IPR001356 GO:0003677
Bpe02g00702 671 SMART HOX_1 357 421 IPR001356 GO:0003677
Bpe02g00702 671 Pfam Associated with HOX 178 312 IPR006563 -
Bpe02g00702 671 Coils Coil 424 444 - -
Bpe02g00702 671 SUPERFAMILY Homeodomain-like 358 424 IPR009057 -
Bpe02g00702 671 Pfam Homeobox KN domain 374 413 IPR008422 GO:0003677|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00702 Bpe04g01489 CCT
Bpe02g00702 Bpe03g01193 CCT
Bpe02g00702 Bpe04g00620 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00702 Bpe-Chr2:4780476 Bpe11g00665 Bpe-Chr11:5111635 2.54E-77 dispersed
Bpe02g00702 Bpe-Chr2:4780476 Bpe03g01193 Bpe-Chr3:30826921 0 wgd
Bpe02g00702 Bpe-Chr2:4780476 Bpe04g00620 Bpe-Chr4:3964303 0 wgd
Bpe02g00702 Bpe-Chr2:4780476 Bpe04g01489 Bpe-Chr4:21461045 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20911 PF07526 POX 4.20E-41 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00702 - - jre:108982860 787.334