Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00738 ATGCTTCACATACTGACCTTCTTCTTCCTCCTGTTTCTCAGAAGCTTTTCTCAGAAAACTTGCCCTAATTGCGGCTCCATCGAAGTGCCTTATCCTCTCAGGACTGCTTCTAACTGCGGCGACTCGGATTATTCTCTCCGGTGCGATTCTATTTCAAACAAGCTTTACCTTGATTCTCTTCATGGAAGTTCTTATCTTATTCTCAGAATCACGCCCTCGTCTCGAACCATGGTGATCAAGCCGTCGCCATGGCTTCCGGCGGCTTGTGTTACTCAAGACATGACGATAAGCGAGGGTCTTTGGCTAAACCAGTCGCTCCCTTTCAACATAACTTCGTCCAACACTATCTTCCTCTTCAATTGCTCTCCTCGCCTCTTAGTCTCGCCTCTGAACTGCACTCCTTCGAGTATCTGTCACGTTTACCTGCAGAGCTCCGGACGGGTCGACTCTGCTCGGGCTGCTCAGTGCAGTACTGGTCTTGTCCCGTGTTGTACTTTCCGAGCAGGCGGTATGCCTTCGGCTTATAAGATCAGACTCCATAGCTCGGGATGTAGAGCTTTTAGAAGCATTCTTTATTTGGATGTTGAAAAGCCTGCAAATCAATGGGAAGAAGGGTTGGAAATTCTGTGGAAACCTCCCCCTGAACCGCTTTGTACATCACAACTCGACTGCCTCGGAGCTTCCCGATGTTCGGTCTCCCATGCAGACAGCCTCCACCGATGCCTCTGCAACGAGAACTATTATTGGGATCATCTTCTCGGCATCTGCGTGAGAAATAAGAAAAACAAAAAATCAAAACTTGGCTTGAAGGTCTCCATATTAATGATCTCCTTCGTCTCTCTATCTCTGGCTATGTCACTAATTACAGTTAAAAAGTGTCGAAGAATCTCGGACCGGGCAAAACTTGCCAAGGTAAGGGAAGACTTGCTAAAGCTAAGCAATGGCGGGAAGCCTGCGAAGCTGTTCAGCTTCAAAGAGGTAAAGAAGGCGACTAACGGATTTTCGAAAAACCGAGTTTTGGGAAGTGGCGGTTTTGGGGAAGTTTACAAAGGAGAACTTCAAGATGGGACGGTGGTGGCTGTGAAATCAGCCAAAATTGGCAGCATAAAGAGCACAAAACAAGTACTAAACGAGGTTGGAATTCTGTCCCAAGTCAATCATAAAAACCTCGTAAGACTTCTTGGGTGTTGTATAGAATCTGAGCAGCCATTGATGATCTACGAGTTCGTTTCGAATGGAACTCTGCACGATCATTTACACGGGAAGTTCTCAACTTTCTTAGATTGGAAAACCAGGCTCAAAATTGCTCTACAAATAGCTGAAGCATTGGCTTATCTACATTCAGCTGCATACTGTCCAATCTATCATAGAGATGTCAAATCCACAAATATATTATTAGATAACAATTTCAATGTGAAAGTTTCCGATTTCGGGCTCTCTCGGCTGGTTAGCCCCGGTTCGAGCCACGTTTCGACTTGTGCTCAAGGAACATTAGGCTACTTGGATCCCGAATACTATAGAACTTACAAGCTAACTGATAAGAGCGATGTTTATAGTTATGGGGTCATCTTGCTGGAGCTTCTAACTTCTCAGAAATCGATTGATTTTTCGAGAGATGAAGAAGATATCAATTTAGTCATTTATGTGAGCCAAAGGGTCAGCAAAAATGACGGAATCATAGAAGTTGTGGATCAAAGATTGCTTGGGAATGACCCGTCCGGCGAATTACCCAGCAGTGTGAAGCTGTTGTTGGAGCTTGCACTTGCCTGTTTGAGAGAGAAGAGGGAAGAAAGGCCATGCATGAAGGATGTCGTTCAAGAGCTTGAATGTCTCGTACATGTTTCAAATCATCAAGCAAAGCCCACTGATGTCAGTCAAGAAAGTATACATCTAAAATGA 1899 44.87 MLHILTFFFLLFLRSFSQKTCPNCGSIEVPYPLRTASNCGDSDYSLRCDSISNKLYLDSLHGSSYLILRITPSSRTMVIKPSPWLPAACVTQDMTISEGLWLNQSLPFNITSSNTIFLFNCSPRLLVSPLNCTPSSICHVYLQSSGRVDSARAAQCSTGLVPCCTFRAGGMPSAYKIRLHSSGCRAFRSILYLDVEKPANQWEEGLEILWKPPPEPLCTSQLDCLGASRCSVSHADSLHRCLCNENYYWDHLLGICVRNKKNKKSKLGLKVSILMISFVSLSLAMSLITVKKCRRISDRAKLAKVREDLLKLSNGGKPAKLFSFKEVKKATNGFSKNRVLGSGGFGEVYKGELQDGTVVAVKSAKIGSIKSTKQVLNEVGILSQVNHKNLVRLLGCCIESEQPLMIYEFVSNGTLHDHLHGKFSTFLDWKTRLKIALQIAEALAYLHSAAYCPIYHRDVKSTNILLDNNFNVKVSDFGLSRLVSPGSSHVSTCAQGTLGYLDPEYYRTYKLTDKSDVYSYGVILLELLTSQKSIDFSRDEEDINLVIYVSQRVSKNDGIIEVVDQRLLGNDPSGELPSSVKLLLELALACLREKREERPCMKDVVQELECLVHVSNHQAKPTDVSQESIHLK 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5126981 5128879 - Bpe008575.1 Bpe02g00738 98887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00738 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Bpe02g00738 632 Gene3D Transferase(Phosphotransferase) domain 1 410 630 - -
Bpe02g00738 632 SMART serkin_6 334 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00738 632 SUPERFAMILY Protein kinase-like (PK-like) 320 618 IPR011009 -
Bpe02g00738 632 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Bpe02g00738 632 Gene3D Phosphorylase Kinase; domain 1 307 409 - -
Bpe02g00738 632 CDD STKc_IRAK 340 609 - -
Bpe02g00738 632 ProSiteProfiles Protein kinase domain profile. 334 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00738 632 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 14 620 IPR045274 GO:0007166
Bpe02g00738 632 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 14 620 - -
Bpe02g00738 632 Pfam Protein tyrosine and serine/threonine kinase 336 608 IPR001245 GO:0004672|GO:0006468
Bpe02g00738 632 Pfam Wall-associated receptor kinase galacturonan-binding 21 79 IPR025287 GO:0030247
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00738 Bpe-Chr2:5126981 Bpe06g00237 Bpe-Chr6:12659778 5.61E-88 dispersed
Bpe14g00403 Bpe-Chr14:3774662 Bpe02g00738 Bpe-Chr2:5126981 1.14E-76 dispersed
Bpe02g00738 Bpe-Chr2:5126981 Bpe02g01393 Bpe-Chr2:17471804 6.39E-81 transposed
Bpe02g00738 Bpe-Chr2:5126981 Bpe11g00405 Bpe-Chr11:3093826 1.54E-80 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63164 PF07714 PK_Tyr_Ser-Thr 5.20E-51 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00738 - - tcc:18598110 910.983