Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00744 ATGGATTGGAATGGCATCTTCAGACCCTTTGTTGCTCGACCTCCAGAATCTTCCTTTAACCTTTTCTGCAACTACAACTTCGATCAATATCCAGGTATCGAAAATTCATTCTCAAATGAAGCCATGGGAACTGAAGAACCTCAAGGTCTATTTACCACAACGGAGATGTACAACTATGGAGGACTTGAGAAGAAGAAGAGGTTAACCAGTGATCAATTAGAGTCCTTAGAGAGAAGTTTCCAAGAGGAGATTAAGCTCGACCCGGACAGGAAAATAAAGCTCTCCCGAGAACTGGGTCTGCAGCCGAGGCAGATAGCTGTTTGGTTTCAAAACAGGCGAGCTAGATGGAAAGCCAAGCAGCTTGAACGACTCTATGATGCGCTTAAACAAGACTATGACATAGTTTCTAGAGAGAAGCTGAAGCTTCAAGAAGAGGTAGTAAAACTGAAAACTATGCTGAGAGAACAAGCCGGAAAAGACCAAGTGTCGGCCATTTTTACAGATATCTCCGGCGAAGAAACTGTCGAAAGTACATCGGTGACGATACGAGGATCACAGAAGACGAGAGTGACAATGACAAACGCTCACCGTCCGATTGGCGAGTGCAATTACGTATACAACGTGGATGACTACAATCAAGTAGCTCCAACACCTTTCTGGCCTCCTGGTGCTTTGCCATCTTATCCTCAATAA 693 44.44 MDWNGIFRPFVARPPESSFNLFCNYNFDQYPGIENSFSNEAMGTEEPQGLFTTTEMYNYGGLEKKKRLTSDQLESLERSFQEEIKLDPDRKIKLSRELGLQPRQIAVWFQNRRARWKAKQLERLYDALKQDYDIVSREKLKLQEEVVKLKTMLREQAGKDQVSAIFTDISGEETVESTSVTIRGSQKTRVTMTNAHRPIGECNYVYNVDDYNQVAPTPFWPPGALPSYPQ 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5186240 5187587 - Bpe008581.1 Bpe02g00744 98893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00744 230 PRINTS Lambda-repressor HTH signature 90 99 IPR000047 GO:0003677
Bpe02g00744 230 PRINTS Lambda-repressor HTH signature 99 115 IPR000047 GO:0003677
Bpe02g00744 230 CDD homeodomain 64 120 IPR001356 GO:0003677
Bpe02g00744 230 Gene3D - 60 127 - -
Bpe02g00744 230 SMART HOX_1 61 123 IPR001356 GO:0003677
Bpe02g00744 230 ProSitePatterns 'Homeobox' domain signature. 94 117 IPR017970 GO:0000981|GO:0006355
Bpe02g00744 230 Coils Coil 230 230 - -
Bpe02g00744 230 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 215 IPR045224 GO:0003700
Bpe02g00744 230 ProSiteProfiles 'Homeobox' domain profile. 59 119 IPR001356 GO:0003677
Bpe02g00744 230 SUPERFAMILY Homeodomain-like 53 121 IPR009057 -
Bpe02g00744 230 Pfam Homeodomain 64 117 IPR001356 GO:0003677
Bpe02g00744 230 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 1 215 - -
Bpe02g00744 230 Coils Coil 111 145 - -
Bpe02g00744 230 Pfam Homeobox associated leucine zipper 119 153 IPR003106 GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00744 Bpe03g01259 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00744 Bpe-Chr2:5186240 Bpe06g00086 Bpe-Chr6:1208829 1.54E-32 dispersed
Bpe02g00744 Bpe-Chr2:5186240 Bpe03g01259 Bpe-Chr3:31194409 1.21E-104 wgd
Bpe02g00744 Bpe-Chr2:5186240 Bpe04g00660 Bpe-Chr4:4156418 6.95E-123 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20916 PF00046 Homeodomain 3.60E-17 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00744 - - tcc:18598127 273.863