Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00748 ATGGAGGAGAAGGACAGCCCATTTTCTGGGTCTCTCGGAGTATCGGAAACCGAGTCTCCCCCTGCGTTAATGACTGAGATGGCGCCAAAAGTGGTCTCTATGGATGGGAAGAAAAGCTTTCTACCTTTGACTACGACTAAATCGACGATGGTGACGAGCGGAGGAGGAGGGTCTGTGAGTGGCGATTTTCTCGGGAAAAAGAAGAGGGGAAGACCGAGAAAATATGATTCGGATGGGAACTTGAGCTTGACTTACCAGAAAATTGCTTTGTCAGATGGGTTTTCTCTGTCACCCACTTCACCTTCCGAGTTTTCTTCCAAAAAAGGGCGAGGTAGGCCTTCTGGGTCTAGAAATTGGCAACTTCTTGCTTCATTAGGTGAATTGTTTGCTAATACTGCTGGAGGAGACTTTACGCCTCATATTGTCACTGTGAAAACAGGGGAGGATGTTGCAGGGAAAATTCTTTCATTTTCACAGAAAGGGCCGAGAGGGATTTGCGTTCTGTCAGCAAATGGGGCTGTCTCAAATGTTACTATTCACCAACCAGGCTCTTCTGCTGGCATTTTGACATACGAGGGTAGATTTGAGATTCTGTCCTTATCTGGGTCGTTCACAGTAACAGACAGTGGTGGTATGAGGAGTAGAACAGGCGGATTGAGCGTCTCCTTGGCAGGTCCAGATGGTCGAGTCATTGGTGGTGGTATCGCTGGTTTATTAGTGGCCGCCAGCCCCATCCAAATTGTCGTCGGAAGTTTCGTGCCGAACGACTTCAAGATGCATAAAAGGAAGTACCGGAGGGAGTATGCAGTCTCTTCCGCAAACAGAGCTGCACCAGAGACCAGGCCAATCCCACAAGACAAAACCGAGAACAAAATTTGCTCCTCTCCGTTGACAGGGCAAACGAACGGAGAAGTAGATGGGTGCGAAAGTGAAAAGCACAATCTCAATTTTCCGTCTGAGAATACTGCATGGACTATCTCGGCTTCTTCATCGGATCAGAGGATATCTCCTGATATTAACATTTCTGTGTCATTTGGAGAGTAG 1044 47.61 MEEKDSPFSGSLGVSETESPPALMTEMAPKVVSMDGKKSFLPLTTTKSTMVTSGGGGSVSGDFLGKKKRGRPRKYDSDGNLSLTYQKIALSDGFSLSPTSPSEFSSKKGRGRPSGSRNWQLLASLGELFANTAGGDFTPHIVTVKTGEDVAGKILSFSQKGPRGICVLSANGAVSNVTIHQPGSSAGILTYEGRFEILSLSGSFTVTDSGGMRSRTGGLSVSLAGPDGRVIGGGIAGLLVAASPIQIVVGSFVPNDFKMHKRKYRREYAVSSANRAAPETRPIPQDKTENKICSSPLTGQTNGEVDGCESEKHNLNFPSENTAWTISASSSDQRISPDINISVSFGE 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5216624 5218503 + Bpe008585.1 Bpe02g00748 98897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00748 347 MobiDBLite consensus disorder prediction 94 116 - -
Bpe02g00748 347 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 258 - -
Bpe02g00748 347 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 8 344 - -
Bpe02g00748 347 ProSiteProfiles PPC domain profile profile. 134 276 IPR005175 -
Bpe02g00748 347 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 8 344 IPR039605 GO:0003680
Bpe02g00748 347 MobiDBLite consensus disorder prediction 314 347 - -
Bpe02g00748 347 CDD DUF296 138 252 IPR005175 -
Bpe02g00748 347 MobiDBLite consensus disorder prediction 1 24 - -
Bpe02g00748 347 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 253 IPR005175 -
Bpe02g00748 347 MobiDBLite consensus disorder prediction 273 347 - -
Bpe02g00748 347 Gene3D - 139 273 - -
Bpe02g00748 347 MobiDBLite consensus disorder prediction 47 79 - -
Bpe02g00748 347 SMART AT_hook_2 107 119 IPR017956 GO:0003677
Bpe02g00748 347 SMART AT_hook_2 66 78 IPR017956 GO:0003677
Bpe02g00748 347 MobiDBLite consensus disorder prediction 287 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00230 Bpe-Chr1:1414201 Bpe02g00748 Bpe-Chr2:5216624 2.20E-54 dispersed
Bpe02g00748 Bpe-Chr2:5216624 Bpe07g00968 Bpe-Chr7:15472111 3.48E-68 dispersed
Bpe02g00748 Bpe-Chr2:5216624 Bpe07g00145 Bpe-Chr7:1020199 6.12E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00748 - - tcc:18598144 378.637