Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g00748 | ATGGAGGAGAAGGACAGCCCATTTTCTGGGTCTCTCGGAGTATCGGAAACCGAGTCTCCCCCTGCGTTAATGACTGAGATGGCGCCAAAAGTGGTCTCTATGGATGGGAAGAAAAGCTTTCTACCTTTGACTACGACTAAATCGACGATGGTGACGAGCGGAGGAGGAGGGTCTGTGAGTGGCGATTTTCTCGGGAAAAAGAAGAGGGGAAGACCGAGAAAATATGATTCGGATGGGAACTTGAGCTTGACTTACCAGAAAATTGCTTTGTCAGATGGGTTTTCTCTGTCACCCACTTCACCTTCCGAGTTTTCTTCCAAAAAAGGGCGAGGTAGGCCTTCTGGGTCTAGAAATTGGCAACTTCTTGCTTCATTAGGTGAATTGTTTGCTAATACTGCTGGAGGAGACTTTACGCCTCATATTGTCACTGTGAAAACAGGGGAGGATGTTGCAGGGAAAATTCTTTCATTTTCACAGAAAGGGCCGAGAGGGATTTGCGTTCTGTCAGCAAATGGGGCTGTCTCAAATGTTACTATTCACCAACCAGGCTCTTCTGCTGGCATTTTGACATACGAGGGTAGATTTGAGATTCTGTCCTTATCTGGGTCGTTCACAGTAACAGACAGTGGTGGTATGAGGAGTAGAACAGGCGGATTGAGCGTCTCCTTGGCAGGTCCAGATGGTCGAGTCATTGGTGGTGGTATCGCTGGTTTATTAGTGGCCGCCAGCCCCATCCAAATTGTCGTCGGAAGTTTCGTGCCGAACGACTTCAAGATGCATAAAAGGAAGTACCGGAGGGAGTATGCAGTCTCTTCCGCAAACAGAGCTGCACCAGAGACCAGGCCAATCCCACAAGACAAAACCGAGAACAAAATTTGCTCCTCTCCGTTGACAGGGCAAACGAACGGAGAAGTAGATGGGTGCGAAAGTGAAAAGCACAATCTCAATTTTCCGTCTGAGAATACTGCATGGACTATCTCGGCTTCTTCATCGGATCAGAGGATATCTCCTGATATTAACATTTCTGTGTCATTTGGAGAGTAG | 1044 | 47.61 | MEEKDSPFSGSLGVSETESPPALMTEMAPKVVSMDGKKSFLPLTTTKSTMVTSGGGGSVSGDFLGKKKRGRPRKYDSDGNLSLTYQKIALSDGFSLSPTSPSEFSSKKGRGRPSGSRNWQLLASLGELFANTAGGDFTPHIVTVKTGEDVAGKILSFSQKGPRGICVLSANGAVSNVTIHQPGSSAGILTYEGRFEILSLSGSFTVTDSGGMRSRTGGLSVSLAGPDGRVIGGGIAGLLVAASPIQIVVGSFVPNDFKMHKRKYRREYAVSSANRAAPETRPIPQDKTENKICSSPLTGQTNGEVDGCESEKHNLNFPSENTAWTISASSSDQRISPDINISVSFGE | 347 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5216624 | 5218503 | + | Bpe008585.1 | Bpe02g00748 | 98897 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g00748 | 347 | MobiDBLite | consensus disorder prediction | 94 | 116 | - | - | |
Bpe02g00748 | 347 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 136 | 258 | - | - | |
Bpe02g00748 | 347 | PANTHER | AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN | 8 | 344 | - | - | |
Bpe02g00748 | 347 | ProSiteProfiles | PPC domain profile profile. | 134 | 276 | IPR005175 | - | |
Bpe02g00748 | 347 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 8 | 344 | IPR039605 | GO:0003680 | |
Bpe02g00748 | 347 | MobiDBLite | consensus disorder prediction | 314 | 347 | - | - | |
Bpe02g00748 | 347 | CDD | DUF296 | 138 | 252 | IPR005175 | - | |
Bpe02g00748 | 347 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Bpe02g00748 | 347 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 139 | 253 | IPR005175 | - | |
Bpe02g00748 | 347 | MobiDBLite | consensus disorder prediction | 273 | 347 | - | - | |
Bpe02g00748 | 347 | Gene3D | - | 139 | 273 | - | - | |
Bpe02g00748 | 347 | MobiDBLite | consensus disorder prediction | 47 | 79 | - | - | |
Bpe02g00748 | 347 | SMART | AT_hook_2 | 107 | 119 | IPR017956 | GO:0003677 | |
Bpe02g00748 | 347 | SMART | AT_hook_2 | 66 | 78 | IPR017956 | GO:0003677 | |
Bpe02g00748 | 347 | MobiDBLite | consensus disorder prediction | 287 | 305 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00230 | Bpe-Chr1:1414201 | Bpe02g00748 | Bpe-Chr2:5216624 | 2.20E-54 | dispersed | |
Bpe02g00748 | Bpe-Chr2:5216624 | Bpe07g00968 | Bpe-Chr7:15472111 | 3.48E-68 | dispersed | |
Bpe02g00748 | Bpe-Chr2:5216624 | Bpe07g00145 | Bpe-Chr7:1020199 | 6.12E-73 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g00748 | - | - | tcc:18598144 | 378.637 |