Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00763 ATGGCAGAAGAACACCGATGCGAAGCGACCGAAGGCCACTGCCTCTGCGCGAACAACTGTGGCTTCTTCGGCAGCCCAGCAACGATGGGCCTTTGCTCCAAATGTTACAGAGACTACCGTCTGAAAGAGCAACAAGAAGCCTCCACCAAATCCACCATCGAAGCTGCTTTCTCAGCCTCCACATCGTCTCCTTCCTCTTCGCCGATCAAACCACTCTCCGATGAATCTACTCCTCCTCCCCTTGCCCTCCCCGAGATAGCCGAAGACTTGAGGATCCCGTCGGTGATGGCAGACGTTCCGGAGGAGGCAAGCCGGCCGAACCGGTGCACGGTTTGCCGAAAAAGAGTCGGGTTCACCGGATTCCGATGCAAATGTGGGACCACATATTGTGGGGTCCACAGATATCCGGAGAAGCACGGCTGTACGTTCGATTTCAAGAAAGTGGGGAAGGAGGAGATAGCCCGTGCCAATCCTCTCGTGAAAGCTGATAAGTTGATGAGGATTTGA 507 54.83 MAEEHRCEATEGHCLCANNCGFFGSPATMGLCSKCYRDYRLKEQQEASTKSTIEAAFSASTSSPSSSPIKPLSDESTPPPLALPEIAEDLRIPSVMADVPEEASRPNRCTVCRKRVGFTGFRCKCGTTYCGVHRYPEKHGCTFDFKKVGKEEIARANPLVKADKLMRI 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5475480 5475986 + Bpe008601.1 Bpe02g00763 98912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00763 168 SUPERFAMILY AN1-like Zinc finger 96 163 IPR035896 -
Bpe02g00763 168 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Bpe02g00763 168 SMART AN1_Zf_4 109 146 IPR000058 GO:0008270
Bpe02g00763 168 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 168 - -
Bpe02g00763 168 Pfam A20-like zinc finger 15 37 IPR002653 GO:0003677|GO:0008270
Bpe02g00763 168 Gene3D - 87 164 IPR035896 -
Bpe02g00763 168 Pfam AN1-like Zinc finger 109 145 IPR000058 GO:0008270
Bpe02g00763 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 57 - -
Bpe02g00763 168 Gene3D - 1 70 - -
Bpe02g00763 168 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 6 1 168 - -
Bpe02g00763 168 ProSiteProfiles Zinc finger AN1-type profile. 103 149 IPR000058 GO:0008270
Bpe02g00763 168 MobiDBLite consensus disorder prediction 52 72 - -
Bpe02g00763 168 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Bpe02g00763 168 MobiDBLite consensus disorder prediction 52 82 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00763 Bpe-Chr2:5475480 Bpe08g00204 Bpe-Chr8:1133815 8.45E-49 dispersed
Bpe03g00331 Bpe-Chr3:5272624 Bpe02g00763 Bpe-Chr2:5475480 2.43E-09 dispersed
Bpe02g00763 Bpe-Chr2:5475480 Bpe04g00670 Bpe-Chr4:4248468 5.80E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00763 - - csv:101211758 236.113