Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00828 AACAAAGATATGATGACATTTCCGGCTTGGTTCAGAGATGGGAAGCCGTTTTTTGCCGTGATTTTCTTGCAGTTTGGATTGGCTGGGATGGATATTCTTTCAAAAGCTGCATTGAATGATGGAATGAGTAACTATGTGTTGGTTGTTTATCGCCATCTTGTTGCCACTGCTGTTATAGCTCCTTTTGCAGTGATCGTTGACAGGAAAGTTAGGCCAAAAATGACACGATCAGTGTTCATCAAGATACTGTTTCTCGGTTTGCTGGAGCCTGTAATCGATCAAAATTTATATTTCATGGGGATGAAGTATACGACAGCAACATATGCAGCTGCTATGTGCAATATTCTTCCAGCCATTACCTTCATAATGGCATGGGTTCTTAGGCTAGAGAAAGTGAAAATCAAATGCCTTAGAAGCCAAGCTAAGATTATGGGAACTCTGGCAACAGTGGCCGGAGCCATGATGATGACACTGATAAAAGGTCCACTGGTTGAGCTGTTTTGGACAAGAGAGACGGCTAATCATGATCAACAAAGGGCCGAGACAAGCATTCATAACTCGATAAAGGGTACGATAATGATCTCCATTGGCTGCTTCAGCTGGGCCTGTTTCATGAACCTGCAAGCAATCACTCTTAAAACATACTCGGCCGAGCTTTCTCTAACAGCCTGGATTTGCCTACTGGGATCACTGGAAGGAACGGTTGTGGCGCTTGTCATGGAGCGCGGGAACAATGCTGTCTGGTCTATAAAATGGGGATCAAAATTACTTGCTCCGGTTTACAGTGGTATATTCTGCTCTGGATTAGCTTACTACATTCAAGGAATAGTGATGAAAGAGCGAGGACCAGTTTTTGTGACAGCTTTCAACCCTCTGTCCATGGTTATAGTTGCTGTGATGAGCACATTTATACTGGCTGAACGCCTGTATCTTGGAAGAATACTTGGCGCCCTTGTAATCATTGGAGGCCTCTATCTTGTAATCTGGGGAAAAGGTAAAGATGAAGCTGAAGCCTCTGCGTCGAAATCTTTACCCACAAAACAGATAACTGATTCATTCGAAAATGGGAAAGCTAACTTCAATCATGAGATCACACGGACTGAGGAATTTGACGGTGGAAAAGTGGGTGATTCAAAGAATTTGACTCTAATTTTACACTAA 1161 42.98 NKDMMTFPAWFRDGKPFFAVIFLQFGLAGMDILSKAALNDGMSNYVLVVYRHLVATAVIAPFAVIVDRKVRPKMTRSVFIKILFLGLLEPVIDQNLYFMGMKYTTATYAAAMCNILPAITFIMAWVLRLEKVKIKCLRSQAKIMGTLATVAGAMMMTLIKGPLVELFWTRETANHDQQRAETSIHNSIKGTIMISIGCFSWACFMNLQAITLKTYSAELSLTAWICLLGSLEGTVVALVMERGNNAVWSIKWGSKLLAPVYSGIFCSGLAYYIQGIVMKERGPVFVTAFNPLSMVIVAVMSTFILAERLYLGRILGALVIIGGLYLVIWGKGKDEAEASASKSLPTKQITDSFENGKANFNHEITRTEEFDGGKVGDSKNLTLILH 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6074033 6075708 + Bpe008669.1 Bpe02g00828 98977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00828 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 333 - -
Bpe02g00828 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
Bpe02g00828 386 PANTHER WAT1-RELATED PROTEIN 11 340 IPR030184 GO:0016021|GO:0022857
Bpe02g00828 386 PANTHER WAT1-RELATED PROTEIN 11 340 - -
Bpe02g00828 386 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020|GO:0016021
Bpe02g00828 386 Pfam EamA-like transporter family 20 156 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00828 Bpe-Chr2:6074033 Bpe15g01004 Bpe-Chr15:19548795 1.38E-117 dispersed
Bpe11g00274 Bpe-Chr11:2001488 Bpe02g00828 Bpe-Chr2:6074033 1.02E-40 dispersed
Bpe15g01102 Bpe-Chr15:20171892 Bpe02g00828 Bpe-Chr2:6074033 6.21E-138 wgd
Bpe02g00828 Bpe-Chr2:6074033 Bpe04g01845 Bpe-Chr4:23693176 1.80E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00828 - - csv:101217902 533.872