Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00845 ATGGTTTTTACCTCTATTCCAGCTTATCTTGACCCAGAAAAATGGCAACAACCAACCTATCAATCTGTAAGCTGTACAGACCATAATTCTCAGCTTCTTCCTCCGCCTCCACCTCCACCTCCACTTCCACTTCCACCGTCACTCTCTTATGGCCGAGGCGGCCCAGGCTCGATAAGACCAGGCTCCATGGTCGACCAAGCTCGAATAGCCAACATGCCGATGCCCGAGCCTGCACTAAAATGCCCACGCTGTGAATCTACCAACACCAAATTCTGCTACTTTAACAACTACAGCCTCACTCAGCCTCGCCATTTTTGCAAAACCTGTCGGAGGTACTGGACCAGAGGAGGCGCTCTACGAAATGTCCCCGTTGGTGGCGGTTTCCGGAGGAATAGACGCATCAAAAGCAGCTCAAAATCTCCGGCCACCTCCGACAACCAAGCTTCTGGTGCTTCAGGTTCTGCTACATCTCCTTCTCTCCCTCCTCTCCGGTTTACGTCTCCCATACGGCATCACCTTACTGAAATTCCAGGCGGAGAAATTGGATTGAATTATAGTTCTTTTCCCACACCATTTAACCCTGCTCCCCAGTTTCCTTTTTTATCTGCATTTGATCCCTTTTCAGCCTCTGGCTATGGCAGCCTGAACCGTCATAAGCAGTCGATTTCTGAGCTCAATCACTTTAATTCCGTGAAAATGGAAGACACGGGACGGGAGTTCGATGTGGGGAAGCAGTTGTTTGGAGGTTCGGGAATTGAGCAGTATTGGAATGTTGGTTCTTCTGCATGGACAGATTTTTCTGGGTTTAGTTCTTCTGCCAATGCTACCAACCATTTTCTATAA 843 48.75 MVFTSIPAYLDPEKWQQPTYQSVSCTDHNSQLLPPPPPPPPLPLPPSLSYGRGGPGSIRPGSMVDQARIANMPMPEPALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNRRIKSSSKSPATSDNQASGASGSATSPSLPPLRFTSPIRHHLTEIPGGEIGLNYSSFPTPFNPAPQFPFLSAFDPFSASGYGSLNRHKQSISELNHFNSVKMEDTGREFDVGKQLFGGSGIEQYWNVGSSAWTDFSGFSSSANATNHFL 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6257405 6258365 + Bpe008684.1 Bpe02g00845 98994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00845 280 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 6 186 IPR045174 GO:0003700|GO:0006355
Bpe02g00845 280 MobiDBLite consensus disorder prediction 122 166 - -
Bpe02g00845 280 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 6 186 - -
Bpe02g00845 280 ProSitePatterns Zinc finger Dof-type signature. 81 117 IPR003851 GO:0003677|GO:0006355
Bpe02g00845 280 ProSiteProfiles Zinc finger Dof-type profile. 79 133 IPR003851 GO:0003677|GO:0006355
Bpe02g00845 280 MobiDBLite consensus disorder prediction 25 62 - -
Bpe02g00845 280 Pfam Dof domain, zinc finger 78 133 IPR003851 GO:0003677|GO:0006355
Bpe02g00845 280 MobiDBLite consensus disorder prediction 137 163 - -
Bpe02g00845 280 MobiDBLite consensus disorder prediction 31 48 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00845 Bpe03g01040 CCT
Bpe02g00845 Bpe04g01330 CCT
Bpe02g00845 Bpe04g01330 ECH
Bpe02g00845 Bpe03g01040 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00845 Bpe-Chr2:6257405 Bpe04g01330 Bpe-Chr4:19894303 7.91E-68 dispersed
Bpe13g00159 Bpe-Chr13:9365687 Bpe02g00845 Bpe-Chr2:6257405 2.49E-34 dispersed
Bpe14g00937 Bpe-Chr14:6966697 Bpe02g00845 Bpe-Chr2:6257405 4.18E-33 dispersed
Bpe15g01111 Bpe-Chr15:20233028 Bpe02g00845 Bpe-Chr2:6257405 5.19E-60 wgd
Bpe02g00845 Bpe-Chr2:6257405 Bpe03g01040 Bpe-Chr3:29734000 8.80E-69 wgd
Bpe02g00845 Bpe-Chr2:6257405 Bpe08g01366 Bpe-Chr8:14735050 1.68E-50 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20921 PF02701 zf-Dof 1.30E-31 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00845 - - qsu:112030762 249.595