Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00869 ATGATATGGCCTTGGTTTTCGTCGTCCACCGAAATTTCGTGCTCCTTTCTCTTTCCGTCTAATCGTACGGTCGCTTTCTTTAAACCCATGGCGGAGGGTACTGAATACTTTCATGTAACGCAGCAAACGAGAAGAGAGAAGCTGAGAATTGTAGCTCTAGTAAATAATATTCATGGGTGCGCGAATTCTATCGGCTCCATGTTTGATTCCTCTGATTTCGTACCTTACTCCAGTGCCAGTGGCCAAGCTTTCAATCGACGAACAGTGACAGAATCATTGACGAGTCTAACCCAGCCCTGTAAATCGAGCACCGGCTGCGTTATGGGGTTAGTCGGAGGAAAAAGAAATACTTGTCCTTCTTCTTTGCCTCATTCACATTATCCACCATCACTTCATAACCCTACACCTGCTGATCGGAGCTACAATGGCGATGGTGAGGTAATGCTTTTTAAGCCGGAAGGTTTATCTCTGTCGCTTTCCTCGCAGCCTAATCGACGAAAGGAATCATCAGTGTGCATTGATCTGCAAAAATATGGGTCTGATAGTTATGGTTCAGGTATCCATGATGAATCTAGAAGCTCGCTTGCCCTCGCTCCAAGTACGGGTTGCTCTATAATTCTGAAGGGCTCGAGATTCTTGAAACCTGCTCAGCTTTTGTTGGAAGAGTTTTGTGACATTGTGGGTAAAACAGGAAGAACACATGCAGAGAAACTAATGGCAGATTCTTCTTTAATGGATCCACACCAGGGGAATTTTATAGGAAGTTTTGACGGAAGTGAATGCAGCAAGAAGAGGTCGATGCTTATCTTCATTCTCGACGAAGTTTACAGAAGATACAAGCACTACTATTCACAGATGCAGGAAGTTGTGACATCATTTGGGTGCATTGTTGGGCTTGGTGATGCAGCTCCATACGTGAGCTTAGCCGTTAAAGCCATGTCCAAGCATTTCAGTGACTTAAAAGATTCAATAACTGACCATCTTCGGTTCTCCTCTAAGGCTTCTGTTCATAATTTCTCAAGACCTGTCAACGGCTCAGGCTTCTTCGATGAGCACCGGCCAGTTTGGCGGCCACAACGGGGCCTTCCCGATGGAGCAGTATCTGTTCTCAGGTCTTGGTTATTCGACCACTTCCTCCATCCTTATCCTACTGATTCAGACAAACACATGCTGGCAGAACAAACTGGTCTGTCTCGGAATCAGGTATCTAACTGGTTTATTAATGCGAGAGTAAGACTTTGGAAGCCAATGGTGGAAGAAATATACACTCTGGAATCAAGGCAACCCCAAAAGTTTTCGAAAGCATCTGCCGAGAGGTTATTGGCTGATGTCCAGGCATCAGCACACCACAACAGCGAGGTTGAGGATCCGAAGCGAGTGAAAGAAAATCCATGGATGAGGAAATCTCACAACCATTTCTGGTCCAATTCCTTGCCTTCCATTGTCGGCGCATGCTTGGCTGATTCAAACGTAGGCGGTCCGGGTAGTGTTTCTTTAACACTTGGTCTTCACCAGAATAACAGTCAGCTTGGTTTATCTGAGTCAGACTTTTCCAATTAG 1560 45.38 MIWPWFSSSTEISCSFLFPSNRTVAFFKPMAEGTEYFHVTQQTRREKLRIVALVNNIHGCANSIGSMFDSSDFVPYSSASGQAFNRRTVTESLTSLTQPCKSSTGCVMGLVGGKRNTCPSSLPHSHYPPSLHNPTPADRSYNGDGEVMLFKPEGLSLSLSSQPNRRKESSVCIDLQKYGSDSYGSGIHDESRSSLALAPSTGCSIILKGSRFLKPAQLLLEEFCDIVGKTGRTHAEKLMADSSLMDPHQGNFIGSFDGSECSKKRSMLIFILDEVYRRYKHYYSQMQEVVTSFGCIVGLGDAAPYVSLAVKAMSKHFSDLKDSITDHLRFSSKASVHNFSRPVNGSGFFDEHRPVWRPQRGLPDGAVSVLRSWLFDHFLHPYPTDSDKHMLAEQTGLSRNQVSNWFINARVRLWKPMVEEIYTLESRQPQKFSKASAERLLADVQASAHHNSEVEDPKRVKENPWMRKSHNHFWSNSLPSIVGACLADSNVGGPGSVSLTLGLHQNNSQLGLSESDFSN 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6655885 6659734 - Bpe008707.1 Bpe02g00869 99018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00869 519 ProSiteProfiles 'Homeobox' domain profile. 353 416 IPR001356 GO:0003677
Bpe02g00869 519 SMART HOX_1 356 420 IPR001356 GO:0003677
Bpe02g00869 519 SMART prehox3 201 326 IPR006563 -
Bpe02g00869 519 Pfam Associated with HOX 206 325 IPR006563 -
Bpe02g00869 519 SUPERFAMILY Homeodomain-like 358 424 IPR009057 -
Bpe02g00869 519 Gene3D - 359 421 - -
Bpe02g00869 519 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 128 511 - -
Bpe02g00869 519 CDD homeodomain 356 417 IPR001356 GO:0003677
Bpe02g00869 519 Pfam Homeobox KN domain 373 412 IPR008422 GO:0003677|GO:0006355
Bpe02g00869 519 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 9 128 511 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00869 Bpe04g01238 CCT
Bpe02g00869 Bpe04g01238 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00869 Bpe-Chr2:6655885 Bpe03g01193 Bpe-Chr3:30826921 4.97E-59 dispersed
Bpe11g01301 Bpe-Chr11:9724154 Bpe02g00869 Bpe-Chr2:6655885 1.22E-61 transposed
Bpe02g00869 Bpe-Chr2:6655885 Bpe04g01238 Bpe-Chr4:17992014 4.01E-131 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20924 PF07526 POX 9.70E-32 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00869 - - jre:109013363 402.134