Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00896 ATGGTTGCTGGTTGCTTTAGTATGTTGAATTGGTGCAGAGGAGGAAAAAGTGGTTTTGCTCAGCATCAGTCGAGTGAAGAAGGCCTCATTACCAACAATGTGAGGGTGTTTTCTTATAGTTCTTTGCGATCAGCGACGGGGAACTTTCATCCATCAAGCAGAATAGGTGGAGGGGGTTATGGAACTGTTTATAGAGGAGTTCTAGGAGATGGTACTCAAATCGCCATCAAATCTCTTTCTGCAGAATCCACGCAAGGAACACAGGAATTTTTTAATGAGGTTCACATGATTTCGAAAATAAGACATCCTAATCTTGTTGAACTGATTGGCTGTTGCATCGAAGACACTCATCGAATATTGGTGTATGAATATCTAGAGAACAACAGTCTTTCAAGTAATTTGTTCGGTTTAAAGAGTAAACATCTAACTCTCCATTGGTCAACTAGAGCTTCTATTTGCCTGGGTGCAGCTTCTGGCCTTAGATTTCTTCATGAGGAAGCTGACCCACAAATTGTTCATAGAGATATTAAGGCTAGCAACATTCTTCTTGATGCAAAATTTCATCCTAAAATAGGAGATTTTGGGCTGGCAAAACTATTTCCTGACAATGTCACTCATATAAGTACTCGAGTGGCTGGAACTGTAGGCTATTTGGCTCCTGAGTATGCATCTTTCGGACAACTTACAAAGAAGGCAGACGTCTACAGTTTTGGGGTACTAATGCTGGAAATAATTAGTGGCAGCAGCAGCAGTAAAGTAGCATTTGGCGAGGACCTGCTGGTTCTTGTGGAATGGGCATGGAAGCTAGGAGAAGAAGAAAGACTACTTGAACTTGTCGATCGAGACTTAACCGAATATCCAGAGGCAGAGGTGATGCGTTTCATTAAAGTTGCTCTATTCTGCACACAAGCAGCTGCAAGCCAGAGGCCAAGCATGAAGCAGGTTGTGGAGATGCTCTCCAAGGATGTCCGTCTTAACGAGAAGATACTAACGAAGCCGGGAGTTTATAAAAAGGCACAAATTTCGACAGAGGAGGCATCATCCTCCCATACACAGAAAAGTAAGCACTCTTCATTCCAATTTAACAGTTCCTCCTCTCAAACTCAGCTGGTTCCAAGGTGA 1122 42.69 MVAGCFSMLNWCRGGKSGFAQHQSSEEGLITNNVRVFSYSSLRSATGNFHPSSRIGGGGYGTVYRGVLGDGTQIAIKSLSAESTQGTQEFFNEVHMISKIRHPNLVELIGCCIEDTHRILVYEYLENNSLSSNLFGLKSKHLTLHWSTRASICLGAASGLRFLHEEADPQIVHRDIKASNILLDAKFHPKIGDFGLAKLFPDNVTHISTRVAGTVGYLAPEYASFGQLTKKADVYSFGVLMLEIISGSSSSKVAFGEDLLVLVEWAWKLGEEERLLELVDRDLTEYPEAEVMRFIKVALFCTQAAASQRPSMKQVVEMLSKDVRLNEKILTKPGVYKKAQISTEEASSSHTQKSKHSSFQFNSSSSQTQLVPR 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7190863 7193346 - Bpe008736.1 Bpe02g00896 99045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00896 373 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Bpe02g00896 373 SUPERFAMILY Protein kinase-like (PK-like) 28 319 IPR011009 -
Bpe02g00896 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bpe02g00896 373 SMART serkin_6 49 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00896 373 CDD STKc_IRAK 55 321 - -
Bpe02g00896 373 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 357 - -
Bpe02g00896 373 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 357 - -
Bpe02g00896 373 MobiDBLite consensus disorder prediction 342 373 - -
Bpe02g00896 373 Gene3D Phosphorylase Kinase; domain 1 14 124 - -
Bpe02g00896 373 Gene3D Transferase(Phosphotransferase) domain 1 125 337 - -
Bpe02g00896 373 ProSiteProfiles Protein kinase domain profile. 49 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00896 373 PIRSF ILK 12 331 - -
Bpe02g00896 373 Pfam Protein tyrosine and serine/threonine kinase 53 319 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00896 Bpe-Chr2:7190863 Bpe03g00881 Bpe-Chr3:28580832 1.47E-114 dispersed
Bpe08g00370 Bpe-Chr8:2248862 Bpe02g00896 Bpe-Chr2:7190863 1.77E-41 dispersed
Bpe02g00896 Bpe-Chr2:7190863 Bpe09g00294 Bpe-Chr9:2347478 7.95E-117 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63170 PF07714 PK_Tyr_Ser-Thr 5.50E-48 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00896 - - csv:101218048 511.146