Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00905 ATGAGACCGTACGGACGCACAGCCCATAACATGTCATCCTCCTCTCTGCGGAAAAAATCGGATTTGACCCTTGTCTCTAAAGTGAGGTTTGGTTGTCTCAGAAAGCTTCTGATTAATCTCCAGGAAGTTATTTTGGGGACCAAACTTTCAGTTCTTTTCCCTGCTATCCCTCTCGCCATTGCTGCTGAGTTTTATGGCTTTGGAAGACCATGGATTTTCGGGCTGAGCTTACTTGGACTTACACCACTGGCAGAACGTGTTAGCTTTCTGACAGAACAAATTGCTTATTACACTGGCCCTACTGTGGGAGGACTATTGAATGCAACGTGTGGAAATGCTACAGAGCTTATTATTGCAGTATTGGCGCTTTCCAAAAGGAAAATAGAAGTGGTGAAGTATTCTCTTCTGGGTTCCGTTCTTTCAAATCTTCTCCTTGTCCTTGGGACCTCTCTCTTTTGTGGCGGTCTTGCAAATCTTAAGAAAGAACAGAAATTTGACAGACGGCAAGGTGATGTGAACTCTCTGATGCTTCTGCTATCCCTACTGTGTCACTTGCTGCCTTTGCTCTTCACTCTTGCTGGAGCCTCAGCTGCTGTAACAACATTTCCAACTCTCGCATTGTCGAGAGCGAGCAGCATAATAATGCTTGTTGCTTACATTGCTTACATAGTTTTCCAATTATGGACTCATCGCCAGCTATTTGAAGCACAGGAATCAGAAGACGACGATCAAGTAGCGGAAGAGCCACCGGTTATAGGATTTTGGAGCGGATTTGCATGGCTGGTCGGAATGACCCTTGTTATTGCTTTGTTGTCTGAATACGTAGTGGCTACAATTGAGGATGCATCAGATTCGTGGGGTTTATCAGTTAGCTTCCTCAGCATAATTTTACTACCAATTGTGGGAAATGCAGCCGAACATGCAGGAGCAATCATTTTTGCTTTCAAGAACAAGCTGGATATATCATTAGGTGTTGCTCTAGGATCCGCGACTCAAATTGCTCTATTTGTGATTCCACTGTGCGTGATTGTTGGTTGGATAATGGGAATCAACATGGACCTTAATTTCAACCTCCTTGAAACTGGCTCTCTTGGCTTATCAATAGTTGCTACAGCATTCACTTTACAGGACGGCACTTCCCATTACATCAAAGGGCTAGTTCTTCTTCTCTGCTACATTGTCATATCAGCTTGTTTCTTTGTATCCACCACACCTTTGAGTAAGTAG 1227 43.85 MRPYGRTAHNMSSSSLRKKSDLTLVSKVRFGCLRKLLINLQEVILGTKLSVLFPAIPLAIAAEFYGFGRPWIFGLSLLGLTPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATELIIAVLALSKRKIEVVKYSLLGSVLSNLLLVLGTSLFCGGLANLKKEQKFDRRQGDVNSLMLLLSLLCHLLPLLFTLAGASAAVTTFPTLALSRASSIIMLVAYIAYIVFQLWTHRQLFEAQESEDDDQVAEEPPVIGFWSGFAWLVGMTLVIALLSEYVVATIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIALFVIPLCVIVGWIMGINMDLNFNLLETGSLGLSIVATAFTLQDGTSHYIKGLVLLLCYIVISACFFVSTTPLSK 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7484437 7486748 - Bpe008745.1 Bpe02g00905 99054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00905 408 TIGRFAM caca2: calcium/proton exchanger 36 400 - -
Bpe02g00905 408 TIGRFAM cax: calcium/proton exchanger 54 400 IPR004798 GO:0006816|GO:0015369
Bpe02g00905 408 Pfam Sodium/calcium exchanger protein 71 228 IPR004837 GO:0016021|GO:0055085
Bpe02g00905 408 Pfam Sodium/calcium exchanger protein 257 397 IPR004837 GO:0016021|GO:0055085
Bpe02g00905 408 Gene3D - 100 240 IPR044880 -
Bpe02g00905 408 Gene3D - 246 401 IPR044880 -
Bpe02g00905 408 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 4 406 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bpe02g00905 408 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 4 406 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00905 Bpe-Chr2:7484437 Bpe07g00693 Bpe-Chr7:13556618 1.15E-111 dispersed
Bpe02g00905 Bpe-Chr2:7484437 Bpe14g00769 Bpe-Chr14:5875539 3.70E-124 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00905 K07300 - csv:101213857 641.343