Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00928 ATGGAAGACAAGGGAAGTGTATTAATGCATCGATATGAATTAGGAAAATTGCTAGGCCAGGGTACTTTTGCTAAGGTACACTATGCGCGAAATCTCATGTCCGGAACGAGTGTGGCCATTAAAATTATCGACAAGGAGAGGGTCATTAAGGTTGGACTGATTGATCAGATCAAGAGAGAAATTTTTGTCATGAGACTGGTTAGGCACCCGAATGTGGTCGAGCTTTATGAAGTGATGGCGAGCAAAACTAAGATCTACTTCGTTATGGAGTACGTGAAAGGCGGGGAGTTGTTCGACAAGATTGCCAAAGGAAAGCTGAAGGAGGATATTGCGCGGAAATATTTTCAGCAGCTGATCAGCGCGGTCGATTACTGCCACAGCAGAGGCGTGAGTCATCGGGATTTAAAACCGGAAAACTTGCTGTTGGATGAACATGGCAACTTAAAAGTTTCTGATTTTGGATTGAGTGCACTTGCAGATTCTAAGAGACAAGATGGATTGCTTCACACGACCTGTGGAACTCCGGCTTATGTTGCTCCCGAAGTGATAAAAAGTAATGGTTATGACGGATCCAAAGCAGATATTTGGTCGTGCGGAGTGATTTTATATGTTTTGTTGGCTGGTTATCTACCTTTCCATGATTCTAATATAATTGAGTTGTATAGAACGATTGAGAAGGGGGAAGTCAGGTACCCAAAATGGTTCCCGATGGAAGTGCAACTATTGCTGTCAAAAATATTGGATCCAAACCCGAATACGCGGATATCCATTTCTGAAATCATGGAAAATTCTTGGTTCAGGGAAGGATTAGCAGACTCTAATCCTCAAGTTAGTTTAGTAGAGGGGAATGAAGCATCGCAAGTGAAAGCTGAAGGAGTTTTTGAAGCTAATGAGAGAATGGACTCTTCTTCAGAGTTAAAACAAGTGGCAAAGCCTTGTAACTTGAATGCCTTTGATATAATCTCATTCTCGTCTGGGTTTGATTTATCTGGTCTGTTTGATGGGATTGACCGGACGAAAGAAACACGATTCACGTCAAACAAGCCTGCAAACACCATCATCTCGAGGTTGGAAGACATGGCCAAGGGTCTGGGAATGAAGGTGAAAAAGAAAGAAGCAGGGCTGTTGAAAATCCAAGCATCAAAAGAAGGCCGAAAAGGCGTCTTAGAAATTGATGCGGAAATTTTCGAGATTACCCCGATGTTTCATATGGTGGAAATGAAGAAGACAGGGGGAGACACCCTGGAATTCAATAGGACGATGAAACAAGATATAAGACCAGCCCTGAAGGACATTGTTTGGACATGGCAAGAGGAGCGGCGATCCATCAACTCCCTCCGTCCAACATAG 1350 43.19 MEDKGSVLMHRYELGKLLGQGTFAKVHYARNLMSGTSVAIKIIDKERVIKVGLIDQIKREIFVMRLVRHPNVVELYEVMASKTKIYFVMEYVKGGELFDKIAKGKLKEDIARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDEHGNLKVSDFGLSALADSKRQDGLLHTTCGTPAYVAPEVIKSNGYDGSKADIWSCGVILYVLLAGYLPFHDSNIIELYRTIEKGEVRYPKWFPMEVQLLLSKILDPNPNTRISISEIMENSWFREGLADSNPQVSLVEGNEASQVKAEGVFEANERMDSSSELKQVAKPCNLNAFDIISFSSGFDLSGLFDGIDRTKETRFTSNKPANTIISRLEDMAKGLGMKVKKKEAGLLKIQASKEGRKGVLEIDAEIFEITPMFHMVEMKKTGGDTLEFNRTMKQDIRPALKDIVWTWQEERRSINSLRPT 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8070253 8071602 + Bpe008769.1 Bpe02g00928 99077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00928 449 CDD CIPK_C 316 430 - -
Bpe02g00928 449 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 443 - -
Bpe02g00928 449 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00928 449 Pfam NAF domain 312 370 IPR004041 GO:0007165
Bpe02g00928 449 SUPERFAMILY Protein kinase-like (PK-like) 8 278 IPR011009 -
Bpe02g00928 449 Gene3D Transferase(Phosphotransferase) domain 1 99 313 - -
Bpe02g00928 449 PANTHER - 2 443 - -
Bpe02g00928 449 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Bpe02g00928 449 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00928 449 Gene3D Phosphorylase Kinase; domain 1 6 98 - -
Bpe02g00928 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bpe02g00928 449 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g00928 449 CDD STKc_SnRK3 11 265 - -
Bpe02g00928 449 Gene3D Kinase associated domain 1, KA1 314 435 - -
Bpe02g00928 449 ProSitePatterns Protein kinases ATP-binding region signature. 18 50 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00928 Bpe-Chr2:8070253 Bpe02g01084 Bpe-Chr2:14011075 5.78E-171 dispersed
Bpe04g01235 Bpe-Chr4:17973721 Bpe02g00928 Bpe-Chr2:8070253 3.63E-48 transposed
Bpe11g01580 Bpe-Chr11:11867642 Bpe02g00928 Bpe-Chr2:8070253 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63172 PF00069 Pkinase 1.60E-74 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00928 K07198 - cit:102619997 664.07