Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00968 ATGAGGAAGACCGTCAGCAAACCCACTAGCAGCCCATGGTACGGCCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGTGAGGCTCCCTCCTATCTAACCGGTGAATACCCTGGAGATTACGGATGGGACACAGCTGGACTCTCCGCTGACCCCGAAACCTTCTCAAAGAACCGGGAGCTAGAGGTCATCCACTCTCGATGGGCTATGCTCGGAGCCCTCGGCTGCGTCTTCCCAGAGCTGCTATCCAGAAACGGCGTGAAATTCGGAGAGGCCGTATGGTTCAAGGCCGGATCTCAGATTTTCAGCGAGGGAGGACTAGACTATCTGGGCAACCCCAGCTTGGTCCACGCACAGAGCATCTTAGCCATCTGGGCTTCTCAGGTCATCTTAATGGGGGCAGTCGAGGGCTACCGTGTAGCCGGAGGGCCACTCGGAGAAGTCACCGACCCAATCTACCCTGGTGGGTCTTTTGACCCGTTGGGTCTGGCCGACGACCCAGAAGCATTTGCAGAGCTGAAAGTGAAAGAGTTAAAAAACGGAAGGCTAGCCATGTTTTCAATGTTCGGATTCTTCGTTCAGGCCATCGTCACCGGAAAGGGACCTTTGGAGAATTTGGCCGATCACCTCGCAGACCCAGTCAACAACAACGCCTGGGCTTATGCCACCAACTTTGTTCCCGGAAAGTGA 690 55.65 MRKTVSKPTSSPWYGPDRVKYLGPFSGEAPSYLTGEYPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9084368 9085057 + Bpe008814.1 Bpe02g00968 99117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00968 229 Pfam Chlorophyll A-B binding protein 29 195 IPR022796 -
Bpe02g00968 229 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 1 229 - -
Bpe02g00968 229 Gene3D Chlorophyll a/b binding protein domain 20 222 - -
Bpe02g00968 229 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 229 IPR001344 GO:0009765|GO:0016020
Bpe02g00968 229 SUPERFAMILY Chlorophyll a-b binding protein 12 226 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00968 Bpe-Chr2:9084368 Bpe14g00731 Bpe-Chr14:5674397 1.11E-153 dispersed
Bpe15g01065 Bpe-Chr15:19919108 Bpe02g00968 Bpe-Chr2:9084368 9.51E-38 dispersed
Bpe02g00247 Bpe-Chr2:1689502 Bpe02g00968 Bpe-Chr2:9084368 4.73E-67 transposed
Bpe03g00505 Bpe-Chr3:24943515 Bpe02g00968 Bpe-Chr2:9084368 4.00E-114 transposed
Bpe11g01102 Bpe-Chr11:8254009 Bpe02g00968 Bpe-Chr2:9084368 1.88E-114 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00968 K08912 - gmx:100805310 458.373