Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01000 ATGTCCACCATTAGAGCTTATGGGAAGGTCAGTGAAGCCGAGCAATTGATGCTCGACGCACGCCGGAGAACCAGAAAGAGAATTGCTATTATCGTTCTATCCTCCGTTGTTCTCGTGGGGGTTATCCTTGCAGCTGTCTTGGGAACTGCAAACTCCAGAAATGGAGGAAAATCCAGAAATGATACGCCTCTCTCTACGTCCATCAAAGCAGTCTGCGATGTAACTTTGTACCCAGATAGTTGTTACAGTGCTCTCAATCCTTTGAAAAACTCGAGTCAGATTACACCGGAGGAGATTTCCAAGATGATAATTCAGGCCGCCATTAATGAGATATCAAAAGCTTCAGACTACATTTTCCATAGTGCTATAAAAAATTCTACCGATAATATGACAGTTCAAGCTTTGGAAAACTGCGAGGAGCTTCTGGATTTAGCTCTAGACCACTTATATAATTCTCTCTCCTCTGCTGGTTCCTCTCTAACCGACGCCTTTGATGACCTACGAACATGGCTGAGCTCCGCGAGTACATATCAACAAACCTGCATAGATGGGTTTGAAGACATTGATGGAGCTTTGAAAAACTCCATTTCCGGTTATTTGCAAAACTCAACTGAATATTCAAGCAACAGCCTCGCCATTGTCACGTGGCTATCGAGCTTCACCGGGGCTCTGAAACTCCGACGACTTATGGAGGCACCCGAGTGGGTGAGTCCGGCGACTCGGCGGCTGTTGCAGAGTGATTTGAGGAAGCAGGCGGACATTGTGGTGGCGAAAGATGGGTCAGGGAAGTTTAAGACGATAAACGCGGCACTGAAGACAGTGAAAAAAAATAGTAATAAGAGGACGGTGATTTACGTGAAGAGGGGAATTTATTACGAGAACGTGGAAGTGGAGAAGACGATGTGGAATGTGGTGATGATCGGAGATGGAATGACTTCCACTATCGTTTCTGCAAGTCTTAACTTCGTTGACGGAACTCCTACTTTCTCATCTGCAACTTTTGCTGCTAAGGGGAAAAACTTCATAGCAATCGACATGGGTTTCCGAAACACCGCCGGACCCAGAAAGCACCAAGCCGTCGCTTTCATGTCCACCTCCGACCAATCCGTCTTCTACCGCTGCCACTTTAACGCCTACCAAGACACTCTCTACGCCCACTCCAACCGCCAATTCTACCGCGACTGTAACGTCTACGGCACCGTGGATTTCATCTTCGGAAACTCCGCTGTCGTCCTCCAAAACACCTTCATCTTCCCCCGATTGCCGAGTCCGGGTCAGAAAAACACTATCACAGCTCAGGGAAAGTTCGACCCTAATCAAAACACAGGTATTTCGATTCAGAACTGCTCGGTTATGCCGTTAGGAGACCTGGGTTCTACGCAGACGTACCTCGGTCGGCCGTGGAAGAACTACTCGACGACTGTCTACATGCAGAGTAACTTGGGTGGTTTGATCAACCCCGACGGATGGTTACCGTGGGTAGGCGATTCAGCACCAAGCACCATTTTTTACGCCGAGTATCAGAATTATGGAGCTGGTTCTTCGACTTCGAAGAGAGTAAAGTGGAAGGGAGTTAGACAAATCAATGGAGCTCAGGCGAGTAAGTTTACAGTTTCTCAATTTCTTCAAGCGGGTAAGTGGATCTCGGCGGCCGGAGTTCCGTTCAAAGCCGGTCTGTAA 1680 47.86 MSTIRAYGKVSEAEQLMLDARRRTRKRIAIIVLSSVVLVGVILAAVLGTANSRNGGKSRNDTPLSTSIKAVCDVTLYPDSCYSALNPLKNSSQITPEEISKMIIQAAINEISKASDYIFHSAIKNSTDNMTVQALENCEELLDLALDHLYNSLSSAGSSLTDAFDDLRTWLSSASTYQQTCIDGFEDIDGALKNSISGYLQNSTEYSSNSLAIVTWLSSFTGALKLRRLMEAPEWVSPATRRLLQSDLRKQADIVVAKDGSGKFKTINAALKTVKKNSNKRTVIYVKRGIYYENVEVEKTMWNVVMIGDGMTSTIVSASLNFVDGTPTFSSATFAAKGKNFIAIDMGFRNTAGPRKHQAVAFMSTSDQSVFYRCHFNAYQDTLYAHSNRQFYRDCNVYGTVDFIFGNSAVVLQNTFIFPRLPSPGQKNTITAQGKFDPNQNTGISIQNCSVMPLGDLGSTQTYLGRPWKNYSTTVYMQSNLGGLINPDGWLPWVGDSAPSTIFYAEYQNYGAGSSTSKRVKWKGVRQINGAQASKFTVSQFLQAGKWISAAGVPFKAGL 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9977321 9979089 + Bpe008849.1 Bpe02g01000 99149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01000 559 TIGRFAM PME_inhib: pectinesterase inhibitor domain 54 217 IPR006501 GO:0004857
Bpe02g01000 559 Pfam Pectinesterase 253 544 IPR000070 GO:0030599|GO:0042545
Bpe02g01000 559 Gene3D - 248 559 IPR012334 -
Bpe02g01000 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 218 IPR035513 -
Bpe02g01000 559 Pfam Plant invertase/pectin methylesterase inhibitor 67 213 IPR006501 GO:0004857
Bpe02g01000 559 PANTHER PECTINESTERASE 5 557 - -
Bpe02g01000 559 PANTHER PECTINESTERASE 5 557 - -
Bpe02g01000 559 SUPERFAMILY Pectin lyase-like 251 558 IPR011050 -
Bpe02g01000 559 CDD PMEI-like_3 70 219 - -
Bpe02g01000 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 219 IPR035513 -
Bpe02g01000 559 SMART PMEI_2 63 213 IPR006501 GO:0004857
Bpe02g01000 559 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01000 Bpe-Chr2:9977321 Bpe09g00049 Bpe-Chr9:328544 1.41E-84 dispersed
Bpe11g01066 Bpe-Chr11:7995301 Bpe02g01000 Bpe-Chr2:9977321 1.31E-21 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01000 - - mcha:111010791 734.176