Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01046 ATGGAGAACACGGGTGATTTAACAGATATTATTCGAGCTAGTGGAGGAATCTATGGCTGTGGAGAAGCCGATTCTAATTCAAACACAAACCCTAGTTCAAACTGGCAATTTTCCTCCGAGCCCATGAATTTTTCTTCAGATTCTCTGGAAACTTTTGGAGATCCATTTTCCTCTACGAGAGATCCGATGCGTCAGCTGCATGATATCTCTGCTTCTTCTTCCGGTATCATCAGTGCAATTGGTTGTGAAGAATCCGTCGGCTTTCCGGGAGTATTTTCCGGTGATTCAATGATTCTTCCTCAGAGAATTTTCCGTGATGAGATTAGAACTCCTGGAAATATTTTTTCCCGTGCGCCTCAAATCTCTCCAACAACTATATTGCCTCTTACTTCTTGCGATCCACCATTGATGGTCAATTCTCCAAGCTCAATTAAATCTTCTTCCATGGTTTCCAATGACATAATTAATCCAATCGGCTTGAACAGTTGCTTAGTCGACAACTCAACTATCCAGATCTCTTCCCCAAGAAATTCGGGTATCAAAAGAAGGAAGAGCCAGGCAAAGAAGGTTGTATGTATTCCAGCTGCAGCGCCTGCAAATAGTAGACCAAGTGGTGAAGTTGTTCCTTCTGATCTCTGGGCATGGAGAAAATATGGACAGAAACCCATTAAAGGTTCTCCATATCCAAGAGGATACTATAGATGTAGTAGCTCAAAAGGATGTTCAGCACGAAAACAAGTGGAGAGGAGCAGAACTGATCCAAACATGTTAGTCATCACCTACACTTCAGAGCATAACCATCCATGGCCGACTCAAAGAAATGCTCTTGCAGGCTCCACCCGTTCGGCACCATCAAGAAACAGCAGCAATGGAGATGGTTCAAAGCCCTCTAATGGCGGTCAGAGCCAAAAGATGACAAGTCCGAAGGAGGAGGAAGACGAAGAAGAACAGATGAAGGAAAATGGAGTTTCATCTGGTTTGTATGTTAAGGAAGAGATGGAGGGAGATCAGATCAAAGGGTTCGTAATGGAAGATGAAGATCAGTTTAATGAAGCATTTTCTGGGTGTACTTCTGAGGATTTCTTCGCTGATTTGGGTGAAATACAAACTGATAGTTCTTTGAACCTCATTTTCGCGGAAGCTTTCTCGGGAAACAAACCGAAAACCTTGGAGTACCCGTTTCCTCTATTTGATTGGACAGGAAACATCTCCACCCCCAACTCGTCCTCGTTTCATCAACAGAAGAAAGATTCTTGA 1257 43.2 MENTGDLTDIIRASGGIYGCGEADSNSNTNPSSNWQFSSEPMNFSSDSLETFGDPFSSTRDPMRQLHDISASSSGIISAIGCEESVGFPGVFSGDSMILPQRIFRDEIRTPGNIFSRAPQISPTTILPLTSCDPPLMVNSPSSIKSSSMVSNDIINPIGLNSCLVDNSTIQISSPRNSGIKRRKSQAKKVVCIPAAAPANSRPSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSAPSRNSSNGDGSKPSNGGQSQKMTSPKEEEDEEEQMKENGVSSGLYVKEEMEGDQIKGFVMEDEDQFNEAFSGCTSEDFFADLGEIQTDSSLNLIFAEAFSGNKPKTLEYPFPLFDWTGNISTPNSSSFHQQKKDS 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11410084 11412394 - Bpe008900.1 Bpe02g01046 99195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01046 418 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 4 402 - -
Bpe02g01046 418 Gene3D WRKY domain 183 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe02g01046 418 SMART WRKY_cls 209 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g01046 418 Pfam WRKY DNA -binding domain 211 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g01046 418 ProSiteProfiles WRKY domain profile. 204 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g01046 418 MobiDBLite consensus disorder prediction 234 329 - -
Bpe02g01046 418 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 402 IPR044810 GO:0003700
Bpe02g01046 418 SUPERFAMILY WRKY DNA-binding domain 207 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe02g01046 418 MobiDBLite consensus disorder prediction 253 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01046 Bpe-Chr2:11410084 Bpe13g00960 Bpe-Chr13:15480354 9.48E-44 dispersed
Bpe01g00864 Bpe-Chr1:17885094 Bpe02g01046 Bpe-Chr2:11410084 1.25E-32 transposed
Bpe02g01076 Bpe-Chr2:13674350 Bpe02g01046 Bpe-Chr2:11410084 2.96E-40 transposed
Bpe06g00583 Bpe-Chr6:16730207 Bpe02g01046 Bpe-Chr2:11410084 2.90E-32 transposed
Bpe10g00503 Bpe-Chr10:12225393 Bpe02g01046 Bpe-Chr2:11410084 1.51E-35 transposed
Bpe15g00672 Bpe-Chr15:17387760 Bpe02g01046 Bpe-Chr2:11410084 1.51E-36 transposed
Bpe11g01029 Bpe-Chr11:7645356 Bpe02g01046 Bpe-Chr2:11410084 1.09E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20932 PF03106 WRKY 2.20E-25 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01046 - - vvi:100250704 390.963