Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01049 ATGGAACAGTTTAAATTGGCCGCAGCAACTCATTCTAAAGAGGATCATTCTGTAAAGGGCATTCAGACAATGGACCATTCTTCTGATTGCTCGAGGATTCCTCAACAACAGCAGATCTCAAGTAGATGGCTTCCAGATGAAGCATGCAGGCCTACCATTGGCGAAGCACCTGTATATTATCCGACTATTGAGGAGTTTGAAGATACACTTGGTTACATAGCAAAGATTCGTGAGGAAGCAGAATCATATGGTATATGTCGGATTGTTCCACCATCTTCATGGAATCCACCATGCATTCTCAAGGAGAAAGCCATACGGGAAAATGCCACATTTTCTACACGGATTCAGCTAGTTGACTTGCTACAAAACAGGGAACCCATGAGAAAAAAAGGTAGAGGCAGAAAAAGAAAACGAAGAAAGCATTCAAGAATGGGAACGTCAAGGAGGCACACAAATCCTGGTTCTGATGCAAACATTTCATCTGAGATTGATGAAAAATTTGGATTCAACTCTGGGTCGGATTTTACTCTAGCTGATTTTCAGAGACATGCTGATTACTTTAAAAAGTGCTACTTTGGAATGAAAGAGGCAGAGGATGAAGTAGATGCCAGTGAAATTAAACCAAAGAAGAGATGGGAACCCTCTGTAGAGGACATTGAAGGCGAGTACTGGCGGATAGTTGAGAAACCAACGGATGAGGTTGAGGTATACTATGGAGCTGACTTGGAGACTGGAGTATTTGGAAGTGGGTTCCCCAAGGCATCATCTGTATCAACTGAAAGCAATTCAGATGAGTATATGACTTCTGGTTGGAATCTTAATAACTTTCCACGCTTGCCAGGTTCTGTATTGTGCTTTGAAGGAAGTGATATCTCGGGAGTTCTGGTCCCATGGCTCTATATTGGGATGTGCTTTTCATCATTTTGTTGGCATGTTGAAGACCACCATCTTTACTCCTTAAACTATCTACACTTGGGTGACCCAAAAGTTTGGTATGGTGTTCCTGGAAGCCATGCTTCTATCTTAGAAACTACAATGAAGAAGCATTTGCCAGATTTGTTTGAAGAACAGCCAGATTTACTGCATGAGTTGGTTACTCAGCTATCACCTTCAGTTCTCAAATCAGAAGGAGTGCCAGTATATCGTGCTGTTCAACATGCGAGGGAGTTTGTTCTGACATTTCCTAGGGCATATCATTCGGGATTCAATTGTGGTTTTAATTGTGCTGAGGCAGTGAATGTGGCACCTATTGATTGGTTGCTTCATGGTCAAAATGCAGTGGAGCTCTATAGCGAGCAGCGTCACAAGACATCAGTGTCCCATGACAAATTATTACTTGGTTCAGCTCAGGCAGCTGTTCAAGCTCTTCGGGAGATTTTTTTTCTTGGAAAGGAAACTCCTAGAACTTTTAGATGGAAATTTGTGTGTGGGAAAGATGGGGCCCTCACAAAGGCAGTGAAGGCCAGGATACAAATGGAGTCGGAGAGAATGGATTGCCTTCCAATTCATTTGAAGTTGAAAAAGATGGATAGAGAATTCGATTGGGAGGAGAGGGAATGCTTTTCTTGCTTTTACGACTTACACTTATCTGCGGTCAGCTGCAAGTGCTCTCCCTGTCGTTTTTCATGCCTTAAACATGCAAATAAATTTTGTTCTTGTGAAATAGATCAAAGATTTGTTCTCATTCGTTATAGTATAGAGGAACTTGATACACTTGTCGATGCCTTGGAAGGAGGATTAGAATCCATCAAACTATGGGCCACAGAGAACTGTCAAAAGATTTCTTCTTCCGTCAAAGAGGATTATCATGCAAATATGGAGTTAGAGAGAGAAACATGCAAATCTAAGTCAGACAACTCAGTAGAAAGATTTCTCATTTCCGAAGAAACAGAGAAGAAGATGAAAATAGATCTTAATTGTTGTTCATATAGTCATGTATCATCAGAAGTTGCGCAGTCAGAATTTCCAAACGGATTATCAAGTCTAAGTTCATTCCAGAAACCAAGTGGTAGTAGTAATGCAGTTATCAAATGTGAAAATGTAGACTTGGGAAAAGAAGATCAAATTGTAGACTTGAACAAAAGAGAAGGCTTTATCGATTTAAATCTTGATATTATGTGCATGGTTAAGGAAATTGGGTGTCTTGGCTCATCGGATGATAAAATAATTGAAAATAAAGTAGAGCAGATTCACTTGTCAGATGGTCGGCAAGATGCAAGTCCTTTTTCGGACAAAAATCATCCTTTGGGCTTGAGAGATTGTAGGAGACAAGATTTTGTTGGTAAGAAGCTGTTCGGGGCTGATGTTGGGTTTCCACTCATACATTCGAAATCAATACCTAGTAGTTTGTCAAAAATGAACGTTCAAGATTCCTTTGTACCAGAGGTAATAGACATTGGATCTGCCATGTTTGGAAACCTCTGGTGCAGTAGGCAGGCTATATTTCCAAAAGGATATAGAAGCCGTGTTAAATTCAAAAGTTTGCTTGATCCCATGGTTAGCGGCAGCTATATATCAGAAGTTCTTGATGCTGGGTTTCTGGGCCCTCTATTCAAGGTTACATCTGAGCAATATCCAAGGGAGTCTTTTGCAAACGTCTCTGCTGATAAGTGCTGGGAAATGGTTGTGCAGAGAATAAACCAGGAAATCGATAGAAAGATGGGTCAATGTAAAAGACTCCATCCTTTGCAGCCATTGCAAAGAATCAATGGGCTTCAAATGTTTGGTTTTCTCTCCCCACATATTAGACAGGCAATAGAGGCGCTCGATCCAGATCATAGATGCTTGGAGTATTGGAATAACTGGCAGTGCAATGGTGATATAAAAGTTAATTTTCCATCGAGTCACTCTTCAGAAATTTCTAGAACAAATGCCTTTGATATCTTAAAAGGAAGCCTTTCTCTAGACGAAGAATTTCAATCCGTGCTAAGAAGGCTGGTAAATAACGCAAGTAGAAGAGACCTAAGCATAATGCATAGCTTTTTCAGCCATGAACATAGAGTTGAAGAATGGAGATTGGCTCTAACATCAGTGATTGAAGAAAAGCTAAAAGACTTGGATAGATAA 3066 40.44 MEQFKLAAATHSKEDHSVKGIQTMDHSSDCSRIPQQQQISSRWLPDEACRPTIGEAPVYYPTIEEFEDTLGYIAKIREEAESYGICRIVPPSSWNPPCILKEKAIRENATFSTRIQLVDLLQNREPMRKKGRGRKRKRRKHSRMGTSRRHTNPGSDANISSEIDEKFGFNSGSDFTLADFQRHADYFKKCYFGMKEAEDEVDASEIKPKKRWEPSVEDIEGEYWRIVEKPTDEVEVYYGADLETGVFGSGFPKASSVSTESNSDEYMTSGWNLNNFPRLPGSVLCFEGSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYLHLGDPKVWYGVPGSHASILETTMKKHLPDLFEEQPDLLHELVTQLSPSVLKSEGVPVYRAVQHAREFVLTFPRAYHSGFNCGFNCAEAVNVAPIDWLLHGQNAVELYSEQRHKTSVSHDKLLLGSAQAAVQALREIFFLGKETPRTFRWKFVCGKDGALTKAVKARIQMESERMDCLPIHLKLKKMDREFDWEERECFSCFYDLHLSAVSCKCSPCRFSCLKHANKFCSCEIDQRFVLIRYSIEELDTLVDALEGGLESIKLWATENCQKISSSVKEDYHANMELERETCKSKSDNSVERFLISEETEKKMKIDLNCCSYSHVSSEVAQSEFPNGLSSLSSFQKPSGSSNAVIKCENVDLGKEDQIVDLNKREGFIDLNLDIMCMVKEIGCLGSSDDKIIENKVEQIHLSDGRQDASPFSDKNHPLGLRDCRRQDFVGKKLFGADVGFPLIHSKSIPSSLSKMNVQDSFVPEVIDIGSAMFGNLWCSRQAIFPKGYRSRVKFKSLLDPMVSGSYISEVLDAGFLGPLFKVTSEQYPRESFANVSADKCWEMVVQRINQEIDRKMGQCKRLHPLQPLQRINGLQMFGFLSPHIRQAIEALDPDHRCLEYWNNWQCNGDIKVNFPSSHSSEISRTNAFDILKGSLSLDEEFQSVLRRLVNNASRRDLSIMHSFFSHEHRVEEWRLALTSVIEEKLKDLDR 1021
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11713484 11720264 - Bpe008903.2 Bpe02g01049 99198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01049 1021 Pfam F/Y rich C-terminus 848 931 IPR003889 GO:0005634
Bpe02g01049 1021 Gene3D - 794 929 - -
Bpe02g01049 1021 Gene3D Cupin 41 415 - -
Bpe02g01049 1021 SMART fyrc_3 850 942 IPR003889 GO:0005634
Bpe02g01049 1021 Pfam JmjC domain, hydroxylase 298 414 IPR003347 -
Bpe02g01049 1021 ProSiteProfiles FYR domain FYRN motif profile. 786 844 IPR003888 GO:0005634
Bpe02g01049 1021 PANTHER LYSINE-SPECIFIC DEMETHYLASE 11 1018 - -
Bpe02g01049 1021 SMART fyrn_3 800 844 IPR003888 GO:0005634
Bpe02g01049 1021 Pfam F/Y-rich N-terminus 796 841 IPR003888 GO:0005634
Bpe02g01049 1021 MobiDBLite consensus disorder prediction 123 161 - -
Bpe02g01049 1021 MobiDBLite consensus disorder prediction 128 147 - -
Bpe02g01049 1021 SMART cupin_9 265 431 IPR003347 -
Bpe02g01049 1021 ProSiteProfiles JmjC domain profile. 265 431 IPR003347 -
Bpe02g01049 1021 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 11 1018 - -
Bpe02g01049 1021 SUPERFAMILY Clavaminate synthase-like 264 454 - -
Bpe02g01049 1021 ProSiteProfiles JmjN domain profile. 56 97 IPR003349 -
Bpe02g01049 1021 Coils Coil 1016 1021 - -
Bpe02g01049 1021 Pfam jmjN domain 57 90 IPR003349 -
Bpe02g01049 1021 ProSiteProfiles FYR domain FYRC motif profile. 846 936 IPR003889 GO:0005634
Bpe02g01049 1021 Pfam C5HC2 zinc finger 520 572 IPR004198 -
Bpe02g01049 1021 SMART JmjN_1 55 96 IPR003349 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01049 Bpe-Chr2:11713484 Bpe08g00806 Bpe-Chr8:10063978 7.80E-56 dispersed
Bpe06g00417 Bpe-Chr6:15565904 Bpe02g01049 Bpe-Chr2:11713484 1.64E-140 transposed
Bpe09g00662 Bpe-Chr9:15252648 Bpe02g01049 Bpe-Chr2:11713484 1.62E-32 transposed
Bpe11g00675 Bpe-Chr11:5191331 Bpe02g01049 Bpe-Chr2:11713484 2.80E-103 transposed
Bpe11g01034 Bpe-Chr11:7672353 Bpe02g01049 Bpe-Chr2:11713484 1.11E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20933 PF02373 JmjC 1.60E-44 CL0029 Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01049 - - zju:107433853 1131.7