Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01072 ATGGAGTCGAAGATTTCAGTTAGGTTTCCGCTTGGGCGCCAGTCATCTTTAGCGCCGGACAGGCACTTAGGAGAATTGGATGATCTGGAAGATGCGGAAATGATCGATCCTGGCGTAAAACTGATGTATTTGGCTAATGAAGGTGATTTGGAAGGAATCGCGGAGCTTTTGGGTTCAGGAATCGACGTCAATTTCCGTGATATTGATGGCCGCACGGCTCTCCATATTTCTGCATGCCAGGGGTATTCTGACGTTGTTGATTTGTTGCTTCAAAGAGGAGCTGATGTTGACCCTAAAGATCGCTGGGGAAGCACGCCTCTTGCGGATGCTATTCACTACAAAAATCATAATGTGATTAAGTTGTTGGAGAAACATGGTGCAAAACCCCTGATGGCCCCAATGCATGTAAAACATGCTCGCGAAGTACCAGAATATGAAATTGATCCAAAAGAGCTTGATTTTACAAACAGTGTCGACATAACAAAGGGAACTTTCCGTATGGCATCATGGCGTGGGATAGACGTTGCTGTAAAAAAGTTTGCGGAGGATGTGATCGCTGAGGAGGATGAAGTGAGGGCATTTCGTGATGAGCTTGCTCTTCTTCAGAAGTTAAGACATCCAAATGTTGTGCAATTTCTAGGTGCAGTGACTCAGAGTAGTCCAATGATGATTGTTACAGAATATTTACCAAAGGGAGATCTTTTTGAATTCTTGAAAATGAAAGGAGCATTAAAACCAATAGTTGCTGTTAGATTTGCCCTTGATATTGCAAGGGGTATGAGTTATTTGCATGAGAATAAGCCTGCACCAATAATTCACTGTGATCTTGAGCCTTCATTGCAGAAATATATTACGGGATGA 861 42.97 MESKISVRFPLGRQSSLAPDRHLGELDDLEDAEMIDPGVKLMYLANEGDLEGIAELLGSGIDVNFRDIDGRTALHISACQGYSDVVDLLLQRGADVDPKDRWGSTPLADAIHYKNHNVIKLLEKHGAKPLMAPMHVKHAREVPEYEIDPKELDFTNSVDITKGTFRMASWRGIDVAVKKFAEDVIAEEDEVRAFRDELALLQKLRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLFEFLKMKGALKPIVAVRFALDIARGMSYLHENKPAPIIHCDLEPSLQKYITG 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13426461 13428693 - Bpe008928.1 Bpe02g01072 99221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01072 286 Gene3D Transferase(Phosphotransferase) domain 1 228 280 - -
Bpe02g01072 286 Pfam Ankyrin repeats (3 copies) 41 129 IPR002110 GO:0005515
Bpe02g01072 286 SMART ANK_2a 102 131 IPR002110 GO:0005515
Bpe02g01072 286 SMART ANK_2a 69 98 IPR002110 GO:0005515
Bpe02g01072 286 PIRSF ILK 2 281 - -
Bpe02g01072 286 Gene3D Phosphorylase Kinase; domain 1 146 227 - -
Bpe02g01072 286 Gene3D - 20 144 IPR036770 -
Bpe02g01072 286 SUPERFAMILY Protein kinase-like (PK-like) 166 279 IPR011009 -
Bpe02g01072 286 SUPERFAMILY Ankyrin repeat 40 131 IPR036770 -
Bpe02g01072 286 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Bpe02g01072 286 Pfam Protein tyrosine and serine/threonine kinase 160 276 IPR001245 GO:0004672|GO:0006468
Bpe02g01072 286 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 279 - -
Bpe02g01072 286 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 279 - -
Bpe02g01072 286 ProSiteProfiles Protein kinase domain profile. 119 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01072 286 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01072 Bpe-Chr2:13426461 Bpe15g00080 Bpe-Chr15:8520551 1.65E-96 dispersed
Bpe11g01118 Bpe-Chr11:8348827 Bpe02g01072 Bpe-Chr2:13426461 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63175 PF07714 PK_Tyr_Ser-Thr 3.80E-24 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01072 - - csv:101205123 447.588