Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01076 ATGGAAACAAGCTCAAATAATCAATTCCTAATTCTCAGTAAGCAAGAAAACGGCTCAGAGTCTCCTCCATCCGCCATTTTCAACAAGTTCATGTCCTCATCTTCCCCCAAAAAGAGCAGTAGAAGATCCATTCACAAAAAGGTAGTTTCAGTGCCACTTAATCTCGAAAGTAACAGCAACACTCCACCTTCTGATTCTTGGGCATGGCGGAAATACGGACAGAAGCCGATCAAAGGCTCCCCTTATCCCAGAGGATATTATCGGTGTAGTAGCTCGAAGGGTTGCCCAGCTAGAAAACAAGTAGAAAGAAGCAATGTTGATCCGACCATGTTAGTCGTCACATATTCCTGTGAGCATAATCATCCGATTCCAGCCTCGAGAAACAGCCACCACAACCACCACTCCGGTGCGGGAACAAAACCGGGATATCAAAAGGTTCTTGCTGACCCAGAACTTGAATCCAATGCTGATGAGAAGATTTCGGATCTTGCCAGCGAAGAGATGGTGATGGAGGATGAGTTCAGTTGGTTTAACGTGATGGAGACGACGACGTCGACGGTTTTGGAGAGTCAAATTTTCAAAGGCACGACGGGAGCCAGTGAAGCCGGAGCTGATTTTGCGATGTTTTTTCCAATGAAGGAGGAGGACGAGTCGCTCTTCGCCGATCTGGGTGAGTTACCGGAATGTTCTGCTGTGTTCGGGCCCGGCGTAGGAGGAGGAGGCAGGATGTTCGAACGAGATGAGGAGCAGCTTCCTCCGGCGTTGTCCCCGACCGTGGTGTGGGGCAACAAGCTGAATTCAGCCGCCACGTGTTGA 816 49.39 METSSNNQFLILSKQENGSESPPSAIFNKFMSSSSPKKSSRRSIHKKVVSVPLNLESNSNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSNVDPTMLVVTYSCEHNHPIPASRNSHHNHHSGAGTKPGYQKVLADPELESNADEKISDLASEEMVMEDEFSWFNVMETTTSTVLESQIFKGTTGASEAGADFAMFFPMKEEDESLFADLGELPECSAVFGPGVGGGGRMFERDEEQLPPALSPTVVWGNKLNSAATC 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13674350 13675485 - Bpe008932.1 Bpe02g01076 99225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01076 271 PANTHER WRKY TRANSCRIPTION FACTOR 65-RELATED 13 235 - -
Bpe02g01076 271 MobiDBLite consensus disorder prediction 52 67 - -
Bpe02g01076 271 ProSiteProfiles WRKY domain profile. 64 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g01076 271 MobiDBLite consensus disorder prediction 1 73 - -
Bpe02g01076 271 SUPERFAMILY WRKY DNA-binding domain 61 124 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe02g01076 271 Pfam WRKY DNA -binding domain 65 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g01076 271 MobiDBLite consensus disorder prediction 122 143 - -
Bpe02g01076 271 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 235 IPR044810 GO:0003700
Bpe02g01076 271 SMART WRKY_cls 63 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g01076 271 MobiDBLite consensus disorder prediction 1 38 - -
Bpe02g01076 271 Gene3D WRKY domain 48 125 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00864 Bpe-Chr1:17885094 Bpe02g01076 Bpe-Chr2:13674350 1.11E-65 dispersed
Bpe02g01076 Bpe-Chr2:13674350 Bpe15g00672 Bpe-Chr15:17387760 1.14E-63 dispersed
Bpe06g00434 Bpe-Chr6:15726359 Bpe02g01076 Bpe-Chr2:13674350 3.18E-28 dispersed
Bpe02g01076 Bpe-Chr2:13674350 Bpe02g01046 Bpe-Chr2:11410084 2.96E-40 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20938 PF03106 WRKY 1.80E-25 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01076 - - jre:109013195 272.322