Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01076 | ATGGAAACAAGCTCAAATAATCAATTCCTAATTCTCAGTAAGCAAGAAAACGGCTCAGAGTCTCCTCCATCCGCCATTTTCAACAAGTTCATGTCCTCATCTTCCCCCAAAAAGAGCAGTAGAAGATCCATTCACAAAAAGGTAGTTTCAGTGCCACTTAATCTCGAAAGTAACAGCAACACTCCACCTTCTGATTCTTGGGCATGGCGGAAATACGGACAGAAGCCGATCAAAGGCTCCCCTTATCCCAGAGGATATTATCGGTGTAGTAGCTCGAAGGGTTGCCCAGCTAGAAAACAAGTAGAAAGAAGCAATGTTGATCCGACCATGTTAGTCGTCACATATTCCTGTGAGCATAATCATCCGATTCCAGCCTCGAGAAACAGCCACCACAACCACCACTCCGGTGCGGGAACAAAACCGGGATATCAAAAGGTTCTTGCTGACCCAGAACTTGAATCCAATGCTGATGAGAAGATTTCGGATCTTGCCAGCGAAGAGATGGTGATGGAGGATGAGTTCAGTTGGTTTAACGTGATGGAGACGACGACGTCGACGGTTTTGGAGAGTCAAATTTTCAAAGGCACGACGGGAGCCAGTGAAGCCGGAGCTGATTTTGCGATGTTTTTTCCAATGAAGGAGGAGGACGAGTCGCTCTTCGCCGATCTGGGTGAGTTACCGGAATGTTCTGCTGTGTTCGGGCCCGGCGTAGGAGGAGGAGGCAGGATGTTCGAACGAGATGAGGAGCAGCTTCCTCCGGCGTTGTCCCCGACCGTGGTGTGGGGCAACAAGCTGAATTCAGCCGCCACGTGTTGA | 816 | 49.39 | METSSNNQFLILSKQENGSESPPSAIFNKFMSSSSPKKSSRRSIHKKVVSVPLNLESNSNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSNVDPTMLVVTYSCEHNHPIPASRNSHHNHHSGAGTKPGYQKVLADPELESNADEKISDLASEEMVMEDEFSWFNVMETTTSTVLESQIFKGTTGASEAGADFAMFFPMKEEDESLFADLGELPECSAVFGPGVGGGGRMFERDEEQLPPALSPTVVWGNKLNSAATC | 271 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 13674350 | 13675485 | - | Bpe008932.1 | Bpe02g01076 | 99225 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01076 | 271 | PANTHER | WRKY TRANSCRIPTION FACTOR 65-RELATED | 13 | 235 | - | - | |
Bpe02g01076 | 271 | MobiDBLite | consensus disorder prediction | 52 | 67 | - | - | |
Bpe02g01076 | 271 | ProSiteProfiles | WRKY domain profile. | 64 | 124 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe02g01076 | 271 | MobiDBLite | consensus disorder prediction | 1 | 73 | - | - | |
Bpe02g01076 | 271 | SUPERFAMILY | WRKY DNA-binding domain | 61 | 124 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe02g01076 | 271 | Pfam | WRKY DNA -binding domain | 65 | 122 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe02g01076 | 271 | MobiDBLite | consensus disorder prediction | 122 | 143 | - | - | |
Bpe02g01076 | 271 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 13 | 235 | IPR044810 | GO:0003700 | |
Bpe02g01076 | 271 | SMART | WRKY_cls | 63 | 123 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe02g01076 | 271 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Bpe02g01076 | 271 | Gene3D | WRKY domain | 48 | 125 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00864 | Bpe-Chr1:17885094 | Bpe02g01076 | Bpe-Chr2:13674350 | 1.11E-65 | dispersed | |
Bpe02g01076 | Bpe-Chr2:13674350 | Bpe15g00672 | Bpe-Chr15:17387760 | 1.14E-63 | dispersed | |
Bpe06g00434 | Bpe-Chr6:15726359 | Bpe02g01076 | Bpe-Chr2:13674350 | 3.18E-28 | dispersed | |
Bpe02g01076 | Bpe-Chr2:13674350 | Bpe02g01046 | Bpe-Chr2:11410084 | 2.96E-40 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20938 | PF03106 | WRKY | 1.80E-25 | CL0274 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01076 | - | - | jre:109013195 | 272.322 |