Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01084 ATGGCGGATTCCAACAAAAAAACCAGTGTCAACAAGAAAGATAAACCCGGTCTTCTCCTTGGACGCTTTGAGGTTGGCAAGCTTCTCGGCCAAGGGACATTCGCTAAAGTCTACCGCGCCCGCAACATAAAGTCAGATGAAATCGTCGCCATTAAAGTCATCGACAAGGAGAAGATCCAAAAAAATGGCCTCATCGCCCACATCAAAAGAGAAATCTCCATCCTCCGCCGTCTCCGCCACCCGAATATAGTCCGGCTCTTCGAAGTTATGGCGACCAAAGAGAAGATCTACTTCGTAATGGAGTATGTTCGAGGTGGCGAGCTTTTCAACAAAGTGGCAAAAGGACGACTAAGAGAAGAACAAGCTCGCACGTACTTCCAACAGCTAATCTCCGCCGTCGGATTTTGTCATTCGCGAGGAGTCTACCATCGGGATCTTAAACCAGAGAATCTCCTTCTAGACGAAAACGGCGACCTAAAAGTCTCCGATTTCGGTCTTAGTGCAGTCTCCGATCAGATTCGGCAGGACGGTCTCTTCCACACATTTTGCGGTACACCGGCGTACGTTGCACCAGAAGTTTTGGCTAGAAAGGGTTATGAAGCTTCAAAATTCGACATATGGTCTTGTGGAATTATTCTCTTCGTTTTAATGGCCGGATATTTGCCATTTAACGATCCAAATATCATGCAAATGTATAAAAAAATTTATCGGGGGGAATTCCGATCACCTAAATGGTTCTCGCCGGAGCTAACCCGGCTACTGAAACGTCTCCTCGATGTAAATCCAGGAACCCGGATTACAATACCTGAGATTATGGAAAACAATTGGTTCAAAAAAGGGTTCAAGCAGGTAAAATTTTACATAGAAGACGACAGGCTCTGCAATATCGAAGATGCCGGCGAACATTTTGATACTTTGCCGGAAAGAGAGCCGGAGAGAATGGAAGAGCGCAGGAAACGTTCGCCGTTAACTCGTCCGGCGAGCTTGAACGCGTTTGATATAATTTCATTCTCGCGAGGTTACGATCTTTCTTCGCTCTTTGAGGATAACGGGGAGGAAGCGAGGGTGATTACCGGAACTCCGGTGAAGAAGATTATAGCGAAGTTGGAGGAGATAGCGAAGGTGGTGAGTTTTACAGTGAGGAAGAAGGATTGCAGAGTGAGAATGGAGGGGACGAGGGAAGGAGAGAGAGGTCCGTTGAGTATAGAGGCGGAGATATTTGAGTTGACGCCGTCGTTGATGGTTGTGGAGGTGAAGAAGAAAGGAGGAGATAAAGTAGAATATGAACAGTTTTGTAAAAGAGAATTGACGCCATTGCTGCGCAGCTTGGAGCTCCATGAATCTCCATCTTCCTCCCATTTACCCTCCGATTCTGAATAA 1380 46.52 MADSNKKTSVNKKDKPGLLLGRFEVGKLLGQGTFAKVYRARNIKSDEIVAIKVIDKEKIQKNGLIAHIKREISILRRLRHPNIVRLFEVMATKEKIYFVMEYVRGGELFNKVAKGRLREEQARTYFQQLISAVGFCHSRGVYHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYEASKFDIWSCGIILFVLMAGYLPFNDPNIMQMYKKIYRGEFRSPKWFSPELTRLLKRLLDVNPGTRITIPEIMENNWFKKGFKQVKFYIEDDRLCNIEDAGEHFDTLPEREPERMEERRKRSPLTRPASLNAFDIISFSRGYDLSSLFEDNGEEARVITGTPVKKIIAKLEEIAKVVSFTVRKKDCRVRMEGTREGERGPLSIEAEIFELTPSLMVVEVKKKGGDKVEYEQFCKRELTPLLRSLELHESPSSSHLPSDSE 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14011075 14012454 + Bpe008941.1 Bpe02g01084 99233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01084 459 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01084 459 ProSiteProfiles NAF domain profile. 324 348 IPR018451 GO:0007165
Bpe02g01084 459 Gene3D Kinase associated domain 1, KA1 326 443 - -
Bpe02g01084 459 SUPERFAMILY Protein kinase-like (PK-like) 19 278 IPR011009 -
Bpe02g01084 459 CDD CIPK_C 330 441 - -
Bpe02g01084 459 Pfam NAF domain 326 382 IPR004041 GO:0007165
Bpe02g01084 459 ProSiteProfiles Protein kinase domain profile. 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01084 459 PANTHER - 1 447 - -
Bpe02g01084 459 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Bpe02g01084 459 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 447 - -
Bpe02g01084 459 SMART serkin_6 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01084 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Bpe02g01084 459 Gene3D Transferase(Phosphotransferase) domain 1 14 325 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00869 Bpe-Chr1:18105500 Bpe02g01084 Bpe-Chr2:14011075 0 dispersed
Bpe02g00928 Bpe-Chr2:8070253 Bpe02g01084 Bpe-Chr2:14011075 5.78E-171 dispersed
Bpe02g01084 Bpe-Chr2:14011075 Bpe01g00862 Bpe-Chr1:17657866 5.54E-160 dispersed
Bpe14g01152 Bpe-Chr14:8578504 Bpe02g01084 Bpe-Chr2:14011075 7.47E-40 dispersed
Bpe02g01084 Bpe-Chr2:14011075 Bpe11g01580 Bpe-Chr11:11867642 9.20E-175 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63177 PF00069 Pkinase 5.80E-77 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01084 - - jre:109011279 679.478