Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01093 ATGGATGAGGACGGAACCAGTCAAGATCATAAGCAAGGAATTAAGCTCTTTGGAAAGAGAATTACGTTTGATGATAAGCATGTAAAGGATGAAGACAAAGTTGAAGATGAACCGAGAGTTGAAAAGAGGCTAGAAAAGATCATCCCTTGCCCTAGATGCAAGAGCATGGAGACCAAGTTCTGTTACTTCAACAACTACAATGTAAACCAACCTAGACATTTCTGCAAGGGTTGCGAGAGGTACTGGACGGCAGGAGGAGCCCTCCGCAACGTTCCCGTCGGTGCTGGGCGCCGGAAAACCAAGCCTTTCTGTCGAAATAGCATTATTGGGATGCCAGAAAGTTGCGTTTATGACCCATCTCCGGCGGCACTGCACCAGTTTCAGATAGATGGGATAATGGAGGACTGGAAAGTTATGGGTGGCCAGGGTAGTTTCCAGCAAGCGTTTCCGGTGAAGAGGCGGAGGGACGGCCATAGAGGTCAAACGTGTTGA 492 48.37 MDEDGTSQDHKQGIKLFGKRITFDDKHVKDEDKVEDEPRVEKRLEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCERYWTAGGALRNVPVGAGRRKTKPFCRNSIIGMPESCVYDPSPAALHQFQIDGIMEDWKVMGGQGSFQQAFPVKRRRDGHRGQTC 163
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14443952 14444443 + Bpe008950.1 Bpe02g01093 99242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01093 163 ProSitePatterns Zinc finger Dof-type signature. 50 86 IPR003851 GO:0003677|GO:0006355
Bpe02g01093 163 Pfam Dof domain, zinc finger 46 101 IPR003851 GO:0003677|GO:0006355
Bpe02g01093 163 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 9 155 - -
Bpe02g01093 163 ProSiteProfiles Zinc finger Dof-type profile. 48 102 IPR003851 GO:0003677|GO:0006355
Bpe02g01093 163 PANTHER CYCLIC DOF FACTOR 2 9 155 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01093 Bpe-Chr2:14443952 Bpe08g00766 Bpe-Chr8:9450191 4.94E-52 dispersed
Bpe11g01139 Bpe-Chr11:8475428 Bpe02g01093 Bpe-Chr2:14443952 1.45E-88 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20940 PF02701 zf-Dof 1.30E-31 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01093 - - zju:107410557 215.698