Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01093 | ATGGATGAGGACGGAACCAGTCAAGATCATAAGCAAGGAATTAAGCTCTTTGGAAAGAGAATTACGTTTGATGATAAGCATGTAAAGGATGAAGACAAAGTTGAAGATGAACCGAGAGTTGAAAAGAGGCTAGAAAAGATCATCCCTTGCCCTAGATGCAAGAGCATGGAGACCAAGTTCTGTTACTTCAACAACTACAATGTAAACCAACCTAGACATTTCTGCAAGGGTTGCGAGAGGTACTGGACGGCAGGAGGAGCCCTCCGCAACGTTCCCGTCGGTGCTGGGCGCCGGAAAACCAAGCCTTTCTGTCGAAATAGCATTATTGGGATGCCAGAAAGTTGCGTTTATGACCCATCTCCGGCGGCACTGCACCAGTTTCAGATAGATGGGATAATGGAGGACTGGAAAGTTATGGGTGGCCAGGGTAGTTTCCAGCAAGCGTTTCCGGTGAAGAGGCGGAGGGACGGCCATAGAGGTCAAACGTGTTGA | 492 | 48.37 | MDEDGTSQDHKQGIKLFGKRITFDDKHVKDEDKVEDEPRVEKRLEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCERYWTAGGALRNVPVGAGRRKTKPFCRNSIIGMPESCVYDPSPAALHQFQIDGIMEDWKVMGGQGSFQQAFPVKRRRDGHRGQTC | 163 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 14443952 | 14444443 | + | Bpe008950.1 | Bpe02g01093 | 99242 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01093 | 163 | ProSitePatterns | Zinc finger Dof-type signature. | 50 | 86 | IPR003851 | GO:0003677|GO:0006355 | |
Bpe02g01093 | 163 | Pfam | Dof domain, zinc finger | 46 | 101 | IPR003851 | GO:0003677|GO:0006355 | |
Bpe02g01093 | 163 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.5-LIKE | 9 | 155 | - | - | |
Bpe02g01093 | 163 | ProSiteProfiles | Zinc finger Dof-type profile. | 48 | 102 | IPR003851 | GO:0003677|GO:0006355 | |
Bpe02g01093 | 163 | PANTHER | CYCLIC DOF FACTOR 2 | 9 | 155 | IPR045174 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01093 | Bpe-Chr2:14443952 | Bpe08g00766 | Bpe-Chr8:9450191 | 4.94E-52 | dispersed | |
Bpe11g01139 | Bpe-Chr11:8475428 | Bpe02g01093 | Bpe-Chr2:14443952 | 1.45E-88 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20940 | PF02701 | zf-Dof | 1.30E-31 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01093 | - | - | zju:107410557 | 215.698 |