Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01114 ATGGATTTTGCAATGAATTTCTTCAACTATGGAGGAGCTCAGTCAAACCCTTTTGGGTGTGAGCTAATGGAAGCACTTGAACCTTTTATGAAGAGTGCTTCTTCTTCAACCTCTGAAACTTCTTCTTCTCTCCCCTATTTTCCCCCCACCCAAACACACCCAGACGTGTCGTCTTCTTCCTTCGCTCAATCATTCACAGAGCCCTACTTAACTCATAACCAATATCAAAACAACCTTTGTTTTGAGCATCCATATTCGAACCAGTTCAACTACCATGCCCATTTTCAAACCCACCAGGATCAAAACCAAACCCAGAAACCTTGGGGCACTATCGATTATAACCAGCCTGAAACAACTCAGACAACGTCTCTCGGTCTCAAGCCGACCAAGCTTTACAGAGGAGTGAGACAGAGGCATTGGGGAAAATGGGTCGCCGAGATTCGTCTGCCAAAGAATCGGACTCGGCTGTGGCTCGGCACCTTCGACACAGCTGACGAAGCAGCAATGGCGTATGATCGGGCAGCTTATAAGCTCAGAGGTGACTCCGCTAAGCTCAATTTCCCTCACCTTAAACACCATAGCTCGACTATAGAGTTCGGGGACCTTAGCAGTCTCCATTCTTCGGTAGATGCGAAGCTCCAAGCAATTTATCAGAGCTTGGCCGATTCGCAAAAACAGGGGAAGAAGGAGAAAGCCGTTGCCTCGAGAGGAAAAGCCAGGTCCCAGCAGGCGAAAACTGGCACAGAGGGTACAAAAATGACGGAAATGGAATCAAATGCTTATGAGCATTACACCATGGATGATGCTTCAGGAAGGTTTGAAACTTCAGCATTTTCAGATCTTGCGTTCGCTGGTCTTGCAAACCAACCATGGGATCCGTCTTCAGAGAATTTCACGATGGCGAACTACCCATCAGAGATTAACTGGGATTCCATCTACCCTTGA 945 47.2 MDFAMNFFNYGGAQSNPFGCELMEALEPFMKSASSSTSETSSSLPYFPPTQTHPDVSSSSFAQSFTEPYLTHNQYQNNLCFEHPYSNQFNYHAHFQTHQDQNQTQKPWGTIDYNQPETTQTTSLGLKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTADEAAMAYDRAAYKLRGDSAKLNFPHLKHHSSTIEFGDLSSLHSSVDAKLQAIYQSLADSQKQGKKEKAVASRGKARSQQAKTGTEGTKMTEMESNAYEHYTMDDASGRFETSAFSDLAFAGLANQPWDPSSENFTMANYPSEINWDSIYP 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14782684 14783628 + Bpe008972.1 Bpe02g01114 99263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01114 314 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 312 - -
Bpe02g01114 314 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 312 - -
Bpe02g01114 314 SUPERFAMILY DNA-binding domain 131 189 IPR016177 GO:0003677
Bpe02g01114 314 PRINTS Ethylene responsive element binding protein signature 132 143 IPR001471 GO:0003700|GO:0006355
Bpe02g01114 314 PRINTS Ethylene responsive element binding protein signature 154 170 IPR001471 GO:0003700|GO:0006355
Bpe02g01114 314 ProSiteProfiles AP2/ERF domain profile. 131 188 IPR001471 GO:0003700|GO:0006355
Bpe02g01114 314 Pfam AP2 domain 132 180 IPR001471 GO:0003700|GO:0006355
Bpe02g01114 314 SMART rav1_2 131 194 IPR001471 GO:0003700|GO:0006355
Bpe02g01114 314 Gene3D AP2/ERF domain 131 189 IPR036955 GO:0003700|GO:0006355
Bpe02g01114 314 MobiDBLite consensus disorder prediction 224 252 - -
Bpe02g01114 314 CDD AP2 130 190 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01114 Bpe04g00453 CCT
Bpe02g00098 Bpe02g01114 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01114 Bpe-Chr2:14782684 Bpe10g00079 Bpe-Chr10:1135229 2.93E-55 dispersed
Bpe12g00247 Bpe-Chr12:2299055 Bpe02g01114 Bpe-Chr2:14782684 4.78E-32 transposed
Bpe02g00098 Bpe-Chr2:735724 Bpe02g01114 Bpe-Chr2:14782684 2.96E-74 wgd
Bpe02g01114 Bpe-Chr2:14782684 Bpe04g00453 Bpe-Chr4:2901562 7.19E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20945 PF00847 AP2 2.50E-14 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01114 K09286 - twl:120010980 233.802