Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01128 ATGGCTGCTGCACTTTCCCCTCGCGAGGAGTTCGTTTACATGGCGAAGCTTGCTGAGCAGGCGGAGCGCTACGAAGAGATGGTCGAGTTCATGGAGAAAGTCTCCGGATTTGTCGACAAGGAGGAGCTCACCGTCGAAGAGAGAAATCTTCTCTCCGTAGCTTACAAGAATGTGATAGGAGCGCGCAGGGCTTCGTGGCGCATCATTTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGCAACGACGACCATGTCGCTGTCATCCGCGACTACAGATCCAAGATCGAGACTGAGCTCTCTAAAATCTGCGATGGGATTCTCAAGCTGCTCGACTCGCGTCTCATTCCATCGGCCTCCGCTGGAGATTCCAAGGTCTTCTACCTCAAAATGAAGGGTGATTATCATAGATACCTTGCGGAGTTCAAAACCGGATCCGAGCGCAAGGAAGCTGCTGAGAGTACCCTCACAGCTTACAAATCTGCTCAGGATATTGCCAATGCAGAACTGGCTCCTACTCATCCCATCCGACTAGGACTAGCCCTTAACTTCTCTGTGTTTTACTATGAGATCCTAAACTCCCCTGATCGTGCTTGCAATCTTGCAAAACAGGCTTTTGATGAAGCAATTGCTGAGTTGGACACTCTGGGCGAGGAATCTTACAAGGATAGCACTTTGATCATGCAACTTCTTCGCGATAACCTCACTTTATGGACATCTGACATGCAGGATGATGCGGCAGAAGAGATAAAGGAAGATCCGAAGCAAGATGGCGAACAACAGTGA 783 50.19 MAAALSPREEFVYMAKLAEQAERYEEMVEFMEKVSGFVDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVAVIRDYRSKIETELSKICDGILKLLDSRLIPSASAGDSKVFYLKMKGDYHRYLAEFKTGSERKEAAESTLTAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDAAEEIKEDPKQDGEQQ 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14903829 14905113 + Bpe008986.1 Bpe02g01128 99277

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01128 260 PANTHER 14-3-3 PROTEIN 5 253 IPR000308 -
Bpe02g01128 260 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Bpe02g01128 260 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Bpe02g01128 260 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Bpe02g01128 260 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Bpe02g01128 260 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Bpe02g01128 260 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Bpe02g01128 260 SMART 1433_4 8 251 IPR023410 -
Bpe02g01128 260 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Bpe02g01128 260 PIRSF 14-3-3 2 250 IPR000308 -
Bpe02g01128 260 Pfam 14-3-3 protein 14 238 IPR023410 -
Bpe02g01128 260 Coils Coil 14 34 - -
Bpe02g01128 260 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Bpe02g01128 260 SUPERFAMILY 14-3-3 protein 6 240 IPR036815 -
Bpe02g01128 260 Gene3D - 1 251 IPR036815 -
Bpe02g01128 260 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 5 253 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01128 K06630 YWHAE; 14-3-3 protein epsilon - zju:107420766 471.085
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g01128 Bpe04g00439 CCT
Bpe02g01128 Bpe14g00462 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01128 Bpe-Chr2:14903829 Bpe11g01215 Bpe-Chr11:9054707 9.54E-155 dispersed
Bpe04g00424 Bpe-Chr4:2741658 Bpe02g01128 Bpe-Chr2:14903829 4.61E-135 transposed
Bpe14g00635 Bpe-Chr14:5195888 Bpe02g01128 Bpe-Chr2:14903829 1.48E-123 transposed
Bpe14g00462 Bpe-Chr14:4169254 Bpe02g01128 Bpe-Chr2:14903829 6.22E-174 wgd
Bpe02g00118 Bpe-Chr2:847844 Bpe02g01128 Bpe-Chr2:14903829 2.90E-07 wgd
Bpe02g01128 Bpe-Chr2:14903829 Bpe04g00439 Bpe-Chr4:2832304 5.01E-162 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g442 . . Bda01g00893 Bda03g00486 . Bpe04g00439 . . Cmo05g00534 Cmo12g00129 Cma01g01616 Cma09g00568 Car01g01232 Car12g00154 Sed04g0158 Cpe06g00431 Cpe07g00142 Bhi04g00777 Tan02g2410 Cmetu03g2141 . Hepe10g0481 . Lcy13g1545 Cla08g01123 Cam08g1580 Cec08g1150 Cco08g1276 Clacu08g1281 . Cre08g1063 . . . . Lsi04g02246 Csa03g04457 Chy04g00245 Cme03g01852 Blo17g00112 Blo18g00127 . Bda13g01393 Bpe02g01128 Bpe14g00462 Bma01g01396 Bma02g00132 Sed05g1594 Cmo01g01661 Cmo09g00555 Cma12g00167 Cma05g00507 Car05g00457 Car09g00495 Cpe11g00447 Cpe02g00365 Bhi09g02451 Tan01g3801 Cmetu04g2791 . Hepe01g2137 Mch11g0676 . Cla11g01392 Cam11g1448 Cec11g1476 Cco11g1473 Clacu11g1607 Cmu11g1426 Cre11g1846 Lsi08g00980 Csa02g02163 Chy03g01354 Cme04g00274
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe02g01128 BCT,CCT 4 242 14-3-3 family AT4G09000 90.8 2.6e-119 425.2
Bpe04g00439 CCT 5 242 14-3-3 family AT4G09000 86.1 9.5e-114 406.8
Bpe11g01215 . 6 249 14-3-3 family AT4G09000 82.8 4.9e-110 394.4
Bpe14g00462 BCT,CCT 1 284 14-3-3 family AT4G09000 75.4 1.1e-109 393.3
Bpe02g01414 . 6 264 14-3-3 family AT4G09000 79.2 4.1e-109 391.3
Bpe06g00098 . 4 250 14-3-3 family AT4G09000 72.9 4.6e-100 361.3
Bpe04g00424 . 11 263 14-3-3 family AT4G09000 72.3 5.6e-98 354.4
Bpe14g00635 . 4 238 14-3-3 family AT4G09000 68.8 2.8e-89 325.5
Bpe14g00124 . 4 214 14-3-3 family AT4G09000 78.2 6.4e-86 314.3
Bpe10g00051 . 10 207 14-3-3 family AT4G09000 72.2 6.4e-78 287.7
Bpe02g01128 BCT,CCT 6 260 14-3-3 family AT1G78300 91.1 2.6e-125 444.9
Bpe14g00462 BCT,CCT 7 302 14-3-3 family AT1G78300 77.5 4.8e-116 414.1
Bpe04g00439 CCT 5 254 14-3-3 family AT1G78300 85.2 4.8e-116 414.1
Bpe11g01215 . 6 244 14-3-3 family AT1G78300 86.2 8.8e-110 393.3
Bpe02g01414 . 6 259 14-3-3 family AT1G78300 82.3 1.5e-109 392.5
Bpe06g00098 . 11 246 14-3-3 family AT1G78300 75.0 1.8e-99 359.0
Bpe04g00424 . 11 258 14-3-3 family AT1G78300 73.8 2.7e-98 355.1
Bpe14g00635 . 7 244 14-3-3 family AT1G78300 69.6 1.6e-90 329.3
Bpe14g00124 . 6 214 14-3-3 family AT1G78300 79.9 4.0e-86 314.7
Bpe10g00051 . 11 207 14-3-3 family AT1G78300 72.1 4.0e-78 288.1
Bpe02g01414 . 6 262 14-3-3 family AT5G38480 84.8 4.7e-116 414.1
Bpe02g01128 BCT,CCT 5 257 14-3-3 family AT5G38480 85.0 3.1e-115 411.4
Bpe11g01215 . 6 246 14-3-3 family AT5G38480 88.4 7.6e-114 406.8
Bpe14g00462 BCT,CCT 7 299 14-3-3 family AT5G38480 74.7 5.1e-110 394.0
Bpe04g00439 CCT 6 255 14-3-3 family AT5G38480 80.0 4.3e-109 391.0
Bpe06g00098 . 10 247 14-3-3 family AT5G38480 73.1 8.4e-97 350.1
Bpe04g00424 . 10 260 14-3-3 family AT5G38480 72.1 3.2e-96 348.2
Bpe14g00124 . 6 214 14-3-3 family AT5G38480 86.1 4.3e-93 337.8
Bpe14g00635 . 7 244 14-3-3 family AT5G38480 72.5 1.8e-91 332.4
Bpe10g00051 . 10 207 14-3-3 family AT5G38480 70.7 2.2e-76 282.3
Bpe02g01128 BCT,CCT 3 242 14-3-3 family AT1G35160 91.3 4.8e-120 427.6
Bpe04g00439 CCT 4 242 14-3-3 family AT1G35160 86.2 1.1e-113 406.4
Bpe14g00462 BCT,CCT 4 284 14-3-3 family AT1G35160 76.9 4.1e-111 397.9
Bpe11g01215 . 6 243 14-3-3 family AT1G35160 85.3 1.7e-109 392.5
Bpe02g01414 . 6 258 14-3-3 family AT1G35160 80.6 1.5e-108 389.4
Bpe06g00098 . 1 252 14-3-3 family AT1G35160 72.2 4.2e-100 361.3
Bpe04g00424 . 1 258 14-3-3 family AT1G35160 70.9 4.4e-97 351.3
Bpe14g00635 . 2 237 14-3-3 family AT1G35160 70.2 5.2e-90 327.8
Bpe14g00124 . 3 214 14-3-3 family AT1G35160 79.8 3.1e-87 318.5
Bpe10g00051 . 11 207 14-3-3 family AT1G35160 72.1 1.0e-77 287.0
Bpe02g01128 BCT,CCT 6 255 14-3-3 family AT5G16050 80.0 5.9e-109 390.6
Bpe02g01414 . 5 259 14-3-3 family AT5G16050 78.8 2.1e-106 382.1
Bpe11g01215 . 5 244 14-3-3 family AT5G16050 82.5 8.0e-106 380.2
Bpe04g00439 CCT 4 255 14-3-3 family AT5G16050 76.2 9.8e-104 373.2
Bpe14g00462 BCT,CCT 4 297 14-3-3 family AT5G16050 68.4 6.3e-103 370.5
Bpe06g00098 . 10 245 14-3-3 family AT5G16050 69.5 4.3e-91 331.3
Bpe04g00424 . 10 257 14-3-3 family AT5G16050 67.7 2.0e-88 322.4
Bpe14g00124 . 4 214 14-3-3 family AT5G16050 79.1 1.6e-85 312.8
Bpe14g00635 . 1 244 14-3-3 family AT5G16050 65.0 1.3e-84 309.7
Bpe10g00051 . 10 207 14-3-3 family AT5G16050 66.7 3.8e-71 265.0
Bpe06g00098 . 6 246 14-3-3 family AT5G10450 85.9 4.8e-114 407.5
Bpe04g00424 . 9 260 14-3-3 family AT5G10450 82.9 9.9e-112 399.8
Bpe02g01128 BCT,CCT 1 251 14-3-3 family AT5G10450 77.8 4.3e-107 384.4
Bpe11g01215 . 7 244 14-3-3 family AT5G10450 78.7 3.2e-102 368.2
Bpe04g00439 CCT 7 242 14-3-3 family AT5G10450 76.8 1.8e-100 362.5
Bpe02g01414 . 7 259 14-3-3 family AT5G10450 72.4 5.7e-99 357.5
Bpe14g00462 BCT,CCT 4 293 14-3-3 family AT5G10450 65.6 8.2e-98 353.6
Bpe10g00051 . 9 207 14-3-3 family AT5G10450 85.4 1.8e-92 335.9
Bpe14g00635 . 1 238 14-3-3 family AT5G10450 66.4 3.2e-86 315.1
Bpe14g00124 . 4 214 14-3-3 family AT5G10450 70.8 9.4e-78 287.0
Bpe02g01414 . 4 259 14-3-3 family AT3G02520 85.5 1.2e-117 419.5
Bpe02g01128 BCT,CCT 6 259 14-3-3 family AT3G02520 85.1 2.6e-117 418.3
Bpe04g00439 CCT 5 259 14-3-3 family AT3G02520 82.4 2.2e-116 415.2
Bpe11g01215 . 4 244 14-3-3 family AT3G02520 88.0 2.5e-115 411.8
Bpe14g00462 BCT,CCT 7 301 14-3-3 family AT3G02520 74.0 1.9e-112 402.1
Bpe06g00098 . 10 245 14-3-3 family AT3G02520 75.4 2.5e-99 358.6
Bpe14g00124 . 6 214 14-3-3 family AT3G02520 87.6 5.7e-96 347.4
Bpe04g00424 . 10 257 14-3-3 family AT3G02520 72.2 9.7e-96 346.7
Bpe14g00635 . 4 243 14-3-3 family AT3G02520 71.1 6.5e-92 334.0
Bpe10g00051 . 10 207 14-3-3 family AT3G02520 74.2 1.3e-79 293.1
Bpe06g00098 . 6 247 14-3-3 family AT5G65430 85.5 1.1e-115 412.9
Bpe04g00424 . 9 259 14-3-3 family AT5G65430 83.3 1.9e-112 402.1
Bpe02g01128 BCT,CCT 1 242 14-3-3 family AT5G65430 79.8 1.3e-105 379.4
Bpe11g01215 . 7 256 14-3-3 family AT5G65430 75.7 1.4e-102 369.4
Bpe04g00439 CCT 4 242 14-3-3 family AT5G65430 76.7 3.4e-101 364.8
Bpe02g01414 . 7 261 14-3-3 family AT5G65430 73.0 6.4e-100 360.5
Bpe14g00462 BCT,CCT 9 284 14-3-3 family AT5G65430 67.9 3.9e-97 351.3
Bpe10g00051 . 9 207 14-3-3 family AT5G65430 85.9 1.5e-93 339.3
Bpe14g00635 . 1 238 14-3-3 family AT5G65430 68.5 1.6e-87 319.3
Bpe14g00124 . 7 214 14-3-3 family AT5G65430 71.8 3.1e-78 288.5
Bpe14g00635 . 1 244 14-3-3 family AT2G42590 82.0 7.7e-112 400.2
Bpe02g01128 BCT,CCT 8 244 14-3-3 family AT2G42590 70.9 3.7e-90 328.2
Bpe04g00439 CCT 8 255 14-3-3 family AT2G42590 67.6 2.9e-87 318.5
Bpe11g01215 . 8 245 14-3-3 family AT2G42590 70.6 6.6e-87 317.4
Bpe02g01414 . 8 260 14-3-3 family AT2G42590 68.8 2.5e-86 315.5
Bpe06g00098 . 11 245 14-3-3 family AT2G42590 66.4 5.2e-84 307.8
Bpe14g00462 BCT,CCT 9 290 14-3-3 family AT2G42590 60.3 7.5e-83 303.9
Bpe04g00424 . 11 257 14-3-3 family AT2G42590 63.2 6.0e-80 294.3
Bpe14g00124 . 8 214 14-3-3 family AT2G42590 66.7 4.4e-67 251.5
Bpe10g00051 . 11 207 14-3-3 family AT2G42590 64.0 9.2e-65 243.8
Bpe14g00635 . 6 243 14-3-3 family AT1G22300 76.9 1.7e-102 369.0
Bpe04g00439 CCT 8 246 14-3-3 family AT1G22300 70.3 1.7e-89 325.9
Bpe02g01128 BCT,CCT 8 246 14-3-3 family AT1G22300 69.0 3.2e-88 321.6
Bpe02g01414 . 4 259 14-3-3 family AT1G22300 66.7 6.0e-87 317.4
Bpe11g01215 . 4 244 14-3-3 family AT1G22300 68.9 8.6e-86 313.5
Bpe14g00462 BCT,CCT 9 288 14-3-3 family AT1G22300 59.6 2.6e-82 302.0
Bpe06g00098 . 11 245 14-3-3 family AT1G22300 64.7 2.7e-79 292.0
Bpe04g00424 . 11 257 14-3-3 family AT1G22300 62.2 5.6e-77 284.3
Bpe14g00124 . 5 214 14-3-3 family AT1G22300 65.6 4.8e-68 254.6
Bpe10g00051 . 11 207 14-3-3 family AT1G22300 61.9 1.3e-60 229.9
Bpe14g00635 . 11 242 14-3-3 family AT1G34760 81.5 2.1e-103 372.1
Bpe04g00439 CCT 8 245 14-3-3 family AT1G34760 70.2 7.1e-88 320.5
Bpe02g01128 BCT,CCT 12 243 14-3-3 family AT1G34760 71.1 9.2e-88 320.1
Bpe02g01414 . 4 259 14-3-3 family AT1G34760 66.8 1.9e-85 312.4
Bpe11g01215 . 4 244 14-3-3 family AT1G34760 70.1 3.3e-85 311.6
Bpe14g00462 BCT,CCT 13 287 14-3-3 family AT1G34760 61.1 1.4e-80 296.2
Bpe06g00098 . 15 248 14-3-3 family AT1G34760 65.0 9.3e-80 293.5
Bpe04g00424 . 11 258 14-3-3 family AT1G34760 61.3 4.8e-76 281.2
Bpe14g00124 . 5 214 14-3-3 family AT1G34760 66.2 5.3e-67 251.1
Bpe10g00051 . 15 207 14-3-3 family AT1G34760 63.2 9.6e-61 230.3
Bpe14g00635 . 5 244 14-3-3 family AT1G26480 80.4 6.6e-108 387.1
Bpe02g01128 BCT,CCT 8 256 14-3-3 family AT1G26480 71.3 4.3e-91 331.3
Bpe04g00439 CCT 8 259 14-3-3 family AT1G26480 67.9 6.8e-89 323.9
Bpe11g01215 . 5 244 14-3-3 family AT1G26480 71.7 2.9e-87 318.5
Bpe02g01414 . 5 259 14-3-3 family AT1G26480 69.0 8.3e-87 317.0
Bpe14g00462 BCT,CCT 9 292 14-3-3 family AT1G26480 62.1 2.5e-83 305.4
Bpe06g00098 . 11 245 14-3-3 family AT1G26480 66.4 5.6e-83 304.3
Bpe04g00424 . 11 257 14-3-3 family AT1G26480 63.6 1.1e-78 290.0
Bpe14g00124 . 4 214 14-3-3 family AT1G26480 65.9 1.2e-66 250.0
Bpe10g00051 . 11 207 14-3-3 family AT1G26480 63.5 2.2e-63 239.2
Bpe14g00635 . 6 236 14-3-3 family AT1G78220 51.7 9.1e-64 240.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000486 6 4 5 6 5 2 5 3 3 3 3 3 6 3 2 6 3 6 6 3 3 3 3 3 3 3 3 6 4 0 114
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g01128 Bpe_Chr02 FPKM 7.784444 12.044502 4.602716 4.677609 4.117263 5.048323 5.138516 8.076325 13.477817 12.651293