Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01140 ATGAACAAGATTCTCTTCGCACAAGCGATATGGGCTGTTATGTTCTACAGTTTCTTTCACTTTCAGATAAACGTCGGATGTGTATCTCAACCGGAACTGCTCGCAAAGTTGCAGAAGACTGCCCCACGATCCCTTTGCAACGCCACGTTTTGCCCGCCGGTTAAACTGAATATTCAGAACCAATTTGTGATAATAGGTAATGGTATTGTTGAAGTGACGATATCAAATCCAGGAGGATACGTCGTAGGAATAAACTTCAATGGCGTCGACAATTTGCTTGAAGTTCTTGACCAAGAAAATAACAGAGGGTACTGGGACCTTGTTTGGAACATAGCAGGAACTCAAAAAACTAAGGGAGTGTTTGACAGAATGGAGGGAACAGATTTCAAAGTAATAGTAGAAAAAGAAGAGCAGGTGGAGCTGTCTTTCACCAGAACCTGGAATTTCTCCCAGGAAGGCAGTGCAGTTCCACTTAACGTTGACAAGAGGTTTGTGCTGCTTCAAGGCTCCTCAGGCTTCTACACCTACGCCATTTACGATCACTTGAAGGAATGGCCTGCTGTTGACATTGATAATACCAGGGTTGCCTTCAAGCTCAGAAAAGACAAGTTCAAGTTCATGGCAATTGGGGATAAGAGACAAAGATACATGCCAGTTCCTGATGACAGGGAGCCGCCCAGAGGCCATGTCCTGGCCTATCCCGAAGCCGTCCGGCTCGTCGACCCCATCGAACCCGAGTTCAGAGGCGAGGTCGACGATAAATATCAGTACTCCAGCGAAACCAGAGATGCTCGTGTCCACGGCTGGATCTCTGAGGACCCACCCACCGGATTTTGGCAAATCTCCGCCAGTGACGAGTTCCGCTCTGGTGGGCCTCTTAAGCAAATCCTCAACTCTCACGTGGGGCCTACAACTCTCTCAGTGTTTCATAGCGCCCATTATGCCGGGGCCGATATGATTATCCGAATCGGAGCAAACGAGGCGTGGAAGAAACTATACGGCCCCATTTTCTTGTACGTTAATTCTTTGTCCAATCGGAGCAATTCTCTCTCGCTATGGGAGGATGCGAAAAATCAGCTGACCAAGGAAATTAATAGTTGGCCGTATGATTTCCCGGCGTCGGAAGACTTCCCTAAGTCTGATCAACGGGGAAGCTTAAGCGGGAGATTACTGATTTCTGATTCGTATGTTAGCGGGGAACTCATGCCGGCGAAAGGAGCCTTGGTCGGAATGGCTCCTCCCGGCGAAGCCGGATCGTGGCAGACAGAATGTAAGGCTTACCAGTTCTGGACAAGCGCCGATGAAGAAGGTTATTTCTCGATCAAGAACATTCGGTTTGGTCAATATAATCTCTATGCGTCTGTTCCTGGCTTCATCGGCGATTTCCTTTATCGTCGTCCCATCTCCATAGCTTCATCCTCTGTTCTGAAGGGGATTGATCTGGGTGATCTGATCTATGAGCCTCCGAGAGATGGTACCACCTTGTGGGAAATAGGCGTTCCTGATCGAACTGCGGCAGAATTCTACGTCCCTGATCCTTATCCTAATCTGACCAACAAGCTTTACGTTAATACCACTCAAAAGTATAGACAGTATGGATTGTGGAAAAAATATGCAGATTTATATCCTAGCCAAGACTTGATCTACACTGTTGGAGTTAGTGATTATTCAGTGGATTGGTTCTTCGCTCAAGTTAACAGAGAGACAGAAAACAACGCATATCAAGGAACTACTTGGCAGATTAAGTTCCAACTTGAAGATGGATTCGTCAATGGAACCTTTGTGTTACGCTTGGCACTTGCCACTGTTCATGCTTCAGAGTTGCAGGTGAGAGTGAACGATGAGAAAGAAGAGCCTCCATTGTTTTCAACTGGAGTGATAGGTAAAGACAATACGATTGCGAGACATGGAATTCACGGGCTTTACAGGCTATTTTCTGCAGAAATTTCGGGGACAAGGCTAGTGGTAGGAGATAATACTATTTTTCTTACACAGGCCTCTTCCAACGTAAGCCCTTTTCAAGGTATTATGTATGATTATATTCGTTTAGAAGGCCCTCCTAATCTTCCCAGTTCTTCTTCACATCAACCGACCGACATTCGAGTGATCGATCCATTTTCTTCAGTTTCTTAG 2133 46.23 MNKILFAQAIWAVMFYSFFHFQINVGCVSQPELLAKLQKTAPRSLCNATFCPPVKLNIQNQFVIIGNGIVEVTISNPGGYVVGINFNGVDNLLEVLDQENNRGYWDLVWNIAGTQKTKGVFDRMEGTDFKVIVEKEEQVELSFTRTWNFSQEGSAVPLNVDKRFVLLQGSSGFYTYAIYDHLKEWPAVDIDNTRVAFKLRKDKFKFMAIGDKRQRYMPVPDDREPPRGHVLAYPEAVRLVDPIEPEFRGEVDDKYQYSSETRDARVHGWISEDPPTGFWQISASDEFRSGGPLKQILNSHVGPTTLSVFHSAHYAGADMIIRIGANEAWKKLYGPIFLYVNSLSNRSNSLSLWEDAKNQLTKEINSWPYDFPASEDFPKSDQRGSLSGRLLISDSYVSGELMPAKGALVGMAPPGEAGSWQTECKAYQFWTSADEEGYFSIKNIRFGQYNLYASVPGFIGDFLYRRPISIASSSVLKGIDLGDLIYEPPRDGTTLWEIGVPDRTAAEFYVPDPYPNLTNKLYVNTTQKYRQYGLWKKYADLYPSQDLIYTVGVSDYSVDWFFAQVNRETENNAYQGTTWQIKFQLEDGFVNGTFVLRLALATVHASELQVRVNDEKEEPPLFSTGVIGKDNTIARHGIHGLYRLFSAEISGTRLVVGDNTIFLTQASSNVSPFQGIMYDYIRLEGPPNLPSSSSHQPTDIRVIDPFSSVS 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14996907 15001614 + Bpe008999.1 Bpe02g01140 99289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01140 710 Pfam Rhamnogalacturonate lyase family 54 251 IPR010325 -
Bpe02g01140 710 Pfam Polysaccharide lyase family 4, domain II 405 473 IPR029413 -
Bpe02g01140 710 CDD RGL4_N 63 340 - -
Bpe02g01140 710 SUPERFAMILY Galactose-binding domain-like 491 684 IPR008979 -
Bpe02g01140 710 PANTHER RHAMNOGALACTURONATE LYASE B-RELATED 13 691 - -
Bpe02g01140 710 CDD RGL4_C 496 684 - -
Bpe02g01140 710 CDD RGL4_M 382 484 IPR029413 -
Bpe02g01140 710 Gene3D - 380 473 - -
Bpe02g01140 710 Pfam Polysaccharide lyase family 4, domain III 494 683 IPR029411 -
Bpe02g01140 710 Gene3D - 491 684 - -
Bpe02g01140 710 Gene3D - 58 355 IPR014718 GO:0030246
Bpe02g01140 710 SUPERFAMILY Starch-binding domain-like 381 473 IPR013784 GO:0030246
Bpe02g01140 710 SUPERFAMILY Galactose mutarotase-like 66 344 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bpe02g01140 710 MobiDBLite consensus disorder prediction 688 710 - -
Bpe02g01140 710 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 13 691 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01140 Bpe04g00412 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01140 Bpe-Chr2:14996907 Bpe04g00412 Bpe-Chr4:2597790 0 dispersed
Bpe14g00479 Bpe-Chr14:4246968 Bpe02g01140 Bpe-Chr2:14996907 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01140 K18195 - jre:109014325 907.516