Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01142 ATGACAACGTTTGAACTATATCGGAGGTCAACGATCGGAATGTGCCTGACTGAGACTTTGGACGAAATGGTTCAGAACGGTACTCTCAGTCCAGAGCTCGCGTTCCAGGTTCTTGTTCAGTTCGACAAGTCTATGACTGAAGCTCTTGAAACCCAAGTAAAGAGCAAGGTCTCCATTAAGGGGCATCTTCACACCTACCGATTCTGCGACAATGTGTGGACTTTTATCTTGCAGGATGCATTGTTTAAGAATGAAGATTGCCAAGAGAATGTCGGCCGAGTCAAAATAGTGGCATGCGATTCGAAGTTACTAACCCAATAG 321 45.17 MTTFELYRRSTIGMCLTETLDEMVQNGTLSPELAFQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKNEDCQENVGRVKIVACDSKLLTQ 106
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15003523 15005651 + Bpe009001.1 Bpe02g01142 99291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01142 106 PIRSF TFIIA_gamma_hum 1 106 IPR003194 GO:0005672|GO:0006367
Bpe02g01142 106 Gene3D - 55 105 IPR009088 GO:0005672|GO:0006367
Bpe02g01142 106 CDD TFIIA_gamma_C 57 102 IPR015871 GO:0005672|GO:0006367
Bpe02g01142 106 Pfam Transcription initiation factor IIA, gamma subunit 60 101 IPR015871 GO:0005672|GO:0006367
Bpe02g01142 106 PANTHER TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 1 106 IPR003194 GO:0005672|GO:0006367
Bpe02g01142 106 CDD TFIIA_gamma_N 4 51 IPR015872 GO:0005672|GO:0006367
Bpe02g01142 106 SUPERFAMILY Transcription factor IIA (TFIIA), beta-barrel domain 52 102 IPR009088 GO:0005672|GO:0006367
Bpe02g01142 106 Pfam Transcription initiation factor IIA, gamma subunit, helical domain 4 49 IPR015872 GO:0005672|GO:0006367
Bpe02g01142 106 Gene3D - 3 54 IPR009083 GO:0005672|GO:0006367
Bpe02g01142 106 SUPERFAMILY Transcription factor IIA (TFIIA), alpha-helical domain 4 54 - -
Bpe02g01142 106 PANTHER TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 1 106 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00487 Bpe02g01142 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01142 Bpe-Chr2:15003523 Bpe14g00479 Bpe-Chr14:4246968 2.81E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01142 K03123 - gmx:100814623 207.994