Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01149 ATGATTGGTTGCTTAATGTATCTCACAACAACTCGTCTTAATATCTTGCATGTTGTAAGTATTCTATCACGATTTATGCGTTGTGCAAGCGAAATACATGTTGACACTATCATGATCAAGCTTCTTGTAATATCAAAGGATGCAGTTCAACTGGACCTCGGATGTGACACTTCAGGTATTGAGGAGATTAAGGTTGCTGTTGTTGACTCAAACTGGTCTGAGAAGCAGGGAAAAATCACGTCATTGAATTTGAAATACATGGCTATCTGGGATGTTAATGTGCATTACAGTGCGAACAGAACGACTGATGGTGATTATCCACTTGAACAGAAGCATTATTTCCCCATTTTTGATGAGCTTTTTGAAGAGGTTGTCTATCCAAAAGGAGATTCAGATGCTGTTACCATTTGCAAGCGAGATGTTGATCTATTACAGCCAGAGACATTTGTGAATGATACAATAATTGACTTTTACATCAAGTATTTGAAGAATCAGATTGATGACGATGAAACAAATAGATTTCATTTTTTCAATAGTTTCTTCTTTCGAAAGATGGCAGACCTAGATAAAGATCCATCCAGTGCTTCTGATGGCAGAGCTGCTTTTTTACGTGTTCGAAAATGGACTAGAAAAGTGGATTTTTTTAACAAGGATTTTGTCTTCATTCCCATAAACTTCAATCTTCATTGGAGTTTAATCATCATATGTCATCCCGGTGAAATCACTAAACACAATGACGGAGACTTGAAGAATTCTCTTAGAGTGCCTTGTATATTGCATATGGATTCTATTAAAGGAAGTCATGGGGGTCTTCAAAATCTTATTCAAAGTTATTTGTGGGAAGAGTGGAAAGAGAGGCAAAAGAAGACAGAGCAAGATATTTCATCCAAATTTTCAAGCCTTCGGTTTCTCCCTCTTGAGCTTCCGCAGCAGGAAAATTTATTTGATTGCGGCTTGTTTTTGCTACACTATCTAGAGCTCTTTCTCAAAGAGGCTCCTGTTAATTTCAATCCTTTCAAAATTTCCAAGTTCTCCAAGTTTCTTAATGTGAATTGGTTTCTGCCTAGTGAAGCTTCTCTCAAACGTGCACTGATTCAAAAATTAATCTTCGAGTTACTTGAAAAGAGATCTCAAGAAACCCCTTCTTTAGCTGCTTGTGATAACCTGAAGTCAAGACTCCCTAAAATGAATGAGAATAAAAGAAGCCTAGATTATCTTTCAGAGAGATGCAATTCTGGTAAATGCGATGGGAATGTATCAAACTCCCAAGCTGGTGAGGGGATTGAACTCACACTAATCTCAGGACCATCTAGAGACAACCAGCTCGTTGACAATTCAGTCCCAGTTGCCAGGGATTTGTCTAATTCGGTGGCTTCTTCTGGATCACTTGAAAAGCATCGATCATTGTCACAGTTGTTATCATACTTCCATTTTGGTGGGGCTATGTCCAGAATACAGGAAGATGGTGAAGAAGAGTGTGGAGAGCATTTTGGGTATTTACCTTCGGAGATTGGAATAGAAACTCAAGGTTGTGATTTTCCATATTCATCGCATGGTTATGATGCTGATGCATCTTATGACTTGGGAATGTCCATGCGAGACGAGCAAAAGGATGTCGACTCATCATCCCCTGAAACATTGGCACATACTTCCAGTTCGAGTGACTCAGAGGATGTTGGGATTATTGAAAATATTCCAAGCCCAAGTCAGAAAGTATGGATCTCTCCATCAATGAAGGATATAGTTGATAGTCCTCCAGACACCGATAAGTTTCACGATGCTGTCGAAACTCACCCTTCCTCGTGTGAAGAAAATCCAGACATCTCACCGAATAAGGACATCGAAATTGTAATGCAAAATAAAGAGCTAGAATCCTATGTGGTTGCACAATCTGATGAACTAGAAGAACATCCTGCGAAGAGGCTGAGATTGACATGTTCTCTTGAAGGGGTAGAAGGTAATAGTCACGTGTGA 1974 39.21 MIGCLMYLTTTRLNILHVVSILSRFMRCASEIHVDTIMIKLLVISKDAVQLDLGCDTSGIEEIKVAVVDSNWSEKQGKITSLNLKYMAIWDVNVHYSANRTTDGDYPLEQKHYFPIFDELFEEVVYPKGDSDAVTICKRDVDLLQPETFVNDTIIDFYIKYLKNQIDDDETNRFHFFNSFFFRKMADLDKDPSSASDGRAAFLRVRKWTRKVDFFNKDFVFIPINFNLHWSLIIICHPGEITKHNDGDLKNSLRVPCILHMDSIKGSHGGLQNLIQSYLWEEWKERQKKTEQDISSKFSSLRFLPLELPQQENLFDCGLFLLHYLELFLKEAPVNFNPFKISKFSKFLNVNWFLPSEASLKRALIQKLIFELLEKRSQETPSLAACDNLKSRLPKMNENKRSLDYLSERCNSGKCDGNVSNSQAGEGIELTLISGPSRDNQLVDNSVPVARDLSNSVASSGSLEKHRSLSQLLSYFHFGGAMSRIQEDGEEECGEHFGYLPSEIGIETQGCDFPYSSHGYDADASYDLGMSMRDEQKDVDSSSPETLAHTSSSSDSEDVGIIENIPSPSQKVWISPSMKDIVDSPPDTDKFHDAVETHPSSCEENPDISPNKDIEIVMQNKELESYVVAQSDELEEHPAKRLRLTCSLEGVEGNSHV 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15080815 15093362 - Bpe009009.1 Bpe02g01149 99298

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01149 657 Pfam Ulp1 protease family, C-terminal catalytic domain 149 347 IPR003653 GO:0006508|GO:0008234
Bpe02g01149 657 SUPERFAMILY Cysteine proteinases 133 372 IPR038765 -
Bpe02g01149 657 MobiDBLite consensus disorder prediction 534 561 - -
Bpe02g01149 657 Gene3D - 174 305 - -
Bpe02g01149 657 MobiDBLite consensus disorder prediction 543 560 - -
Bpe02g01149 657 Gene3D - 126 370 - -
Bpe02g01149 657 ProSiteProfiles Ubiquitin-like protease family profile. 134 328 IPR003653 GO:0006508|GO:0008234
Bpe02g01149 657 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 29 603 - -
Bpe02g01149 657 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 29 603 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01149 K08596 SENP7; sentrin-specific protease 7 [EC:3.4.22.68] - zju:107421286 612.838
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01149 Bpe-Chr2:15080815 Bpe05g00837 Bpe-Chr5:21603959 3.01E-08 dispersed
Bpe11g01770 Bpe-Chr11:14090253 Bpe02g01149 Bpe-Chr2:15080815 1.08E-28 transposed
Bpe14g00486 Bpe-Chr14:4328779 Bpe02g01149 Bpe-Chr2:15080815 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g511 . . . . . . . . . Cmo12g00152 . . . Car12g00180 . . Cpe07g00168 . . . . . . . . . . . . . . . . . . . . . . . . . Bda13g01358 Bpe02g01149 . . Bma02g00113 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001964 1 5 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 4 2 2 2 2 2 2 2 2 1 3 5 1 65
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g01149 Bpe_Chr02 FPKM 32.939976 34.020935 52.299095 54.180206 87.546425 84.914406 88.722862 117.126114 116.417183 118.119232