Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01151 ATGTTTCCTTTTCAGAGCTCTTCCTATCCGAAGTGGTTGAATCTTAACAAACACATTCAACATACAAACATGTCGATCGACTCAGTCGACGCCGGCGATTATTCGAACTCGACCTCGATGGATATGACGAAATCGACGGAAGCCAGCAAGAGTCACAAAGAAGCAGAGAGAAGACGTAGGCAGCGAATCAATGCCCATCTCTCCACCCTACGGAGTCTTCTTCCGAACACCACCAAGACAGATAAGGCGTCGCTGCTAGCTGAAGTAGTGAGCCACGTGAAGAATCTGAGAAGAGACCTTTGCAGTAACAACAGCGAAGAACCGGAGCTTGGATTAGAGCCATGCCTGTTTCCGACGGAGTTTGACGAGGCGACTCTGAGTTTCTGCGATGACGAAGGAAAGCTCGTGAAAGCGATCGTCTGCTGCGCGGACCGACCGGGTCTGGTCATGGATTTAGCGCAAGCTATCCGGTCGGTTCAAGCCAGAGTGGTCCGGGCTGAAATGACAACAGTAGGTACCCGGACAAAAAACGTGGTGGTGTTGAAATGGACTGGCGGAGTATGCGGCGGAGAAGAAAATATTGCCTCTCTGAAGCGGGTGTTGAAGGCCGTAGTAGACAACCGGATTTCGGATCCTAGAGTGACCCAGCTAGCTCGGGCTAATAATTCAATTAATCTAGAGCATTATTTGCATTTAGGTTAG 702 49.86 MFPFQSSSYPKWLNLNKHIQHTNMSIDSVDAGDYSNSTSMDMTKSTEASKSHKEAERRRRQRINAHLSTLRSLLPNTTKTDKASLLAEVVSHVKNLRRDLCSNNSEEPELGLEPCLFPTEFDEATLSFCDDEGKLVKAIVCCADRPGLVMDLAQAIRSVQARVVRAEMTTVGTRTKNVVVLKWTGGVCGGEENIASLKRVLKAVVDNRISDPRVTQLARANNSINLEHYLHLG 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15119063 15119856 + Bpe009011.1 Bpe02g01151 99300

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01151 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Bpe02g01151 233 MobiDBLite consensus disorder prediction 35 59 - -
Bpe02g01151 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 114 IPR036638 GO:0046983
Bpe02g01151 233 SUPERFAMILY ACT-like 139 206 IPR045865 -
Bpe02g01151 233 Gene3D - 41 105 IPR036638 GO:0046983
Bpe02g01151 233 PANTHER TRANSCRIPTION FACTOR BHLH30 31 212 IPR045847 GO:0003700|GO:0006355
Bpe02g01151 233 PANTHER OS09G0463900 PROTEIN 31 212 - -
Bpe02g01151 233 Gene3D - 138 211 - -
Bpe02g01151 233 Pfam Helix-loop-helix DNA-binding domain 50 96 IPR011598 GO:0046983
Bpe02g01151 233 SMART finulus 53 102 IPR011598 GO:0046983
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01151 - - - pper:18793831 223.402
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01151 Bpe-Chr2:15119063 Bpe02g02290 Bpe-Chr2:23659959 5.21E-38 dispersed
Bpe14g00487 Bpe-Chr14:4356039 Bpe02g01151 Bpe-Chr2:15119063 2.00E-114 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g504 . . Bda01g00912 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone9ag1448 . . . . . . . . . . Bpe02g01151 . Bma01g01373 Bma02g00111 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007814 1 1 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 0 1 2 2 1 1 35
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20949 PF00010 HLH 4.50E-12 No_clan Bpe TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g01151 Bpe_Chr02 FPKM 0.0 0.30045 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0