Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01154 ATGAAAGGTGACTACGCGCAGCCAAAGAATGAAGCTCAGAACATCTTCTCTAAGCTTCACCAACGCCACAGCCACCAGAACCAACCGCAGCTACAGGCCCTTCCGTTTTCCAATCCCTTTCCCCTCTCCGCAGTTAGAGAATGTCAAACTTCAGAAGAAGACGACGCCAGTCGAACCAGGGGACAACCGGCCGCCGGGGTAATGGAGCCCAAATTACATCCCGAGCTCAGCTCCGGCGACGGAGCAAGTCTAGAAGTCGTAAGGCGCCCGAGGGGCCGCCCACCCGGTTCCAAAAACAAACCAAAACCACCCGTTATCATAACTCGAGACTCGGAACCGGCGATGAGCCCTTACATCCTTGAAGTGCCGGGAGGTAACGACGTAGTGGAAGCCATTTCCTACTTCTCTCGCCGGAAAAATATGGGTCTCTGCATCCTCAGTGGCTCCGGAACCGTCGCTAATGTAAGTCTCCGGCAGCCATCGAACACTCCAGGACCTATCATCACCTTCCACGGCCGGTTCGAGATCTTATCGATTTCGGCCACCTTGCTCCCTCAGGCGATGTCGTTCACGGTTCCCAACGGCTTCACCATTTCTCTTGCCGGCCCTCAAGGACAGATCATCGGCGGTTTAGTCGCCGGATCACTGGTTGCAGTCGGGACGGTGTTCGTGATAGCCGCTTCTTTTAACAACCCTTCCTATCATCGGCTGTCGGACGAAGACGAGGTTAGAAACTCAGTTTCAGGCGGTGAAGGTCAATCGCCACCTATATCCGGAGGCGGAGAGAGTGCTGGGCACGCTCCGGTTGACTCGTGCGTGATGCCCGTGTACAGTTGCCATGTTCCTTCCGATGTGATCTGGGCTTCTGCAGCCAGACAAGCGACGGCGCCGCCACACCCACCGTATTGCTAG 912 56.03 MKGDYAQPKNEAQNIFSKLHQRHSHQNQPQLQALPFSNPFPLSAVRECQTSEEDDASRTRGQPAAGVMEPKLHPELSSGDGASLEVVRRPRGRPPGSKNKPKPPVIITRDSEPAMSPYILEVPGGNDVVEAISYFSRRKNMGLCILSGSGTVANVSLRQPSNTPGPIITFHGRFEILSISATLLPQAMSFTVPNGFTISLAGPQGQIIGGLVAGSLVAVGTVFVIAASFNNPSYHRLSDEDEVRNSVSGGEGQSPPISGGGESAGHAPVDSCVMPVYSCHVPSDVIWASAARQATAPPHPPYC 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15141118 15142029 + Bpe009014.1 Bpe02g01154 99303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01154 303 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 35 300 - -
Bpe02g01154 303 MobiDBLite consensus disorder prediction 10 37 - -
Bpe02g01154 303 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 231 IPR005175 -
Bpe02g01154 303 ProSiteProfiles PPC domain profile profile. 112 250 IPR005175 -
Bpe02g01154 303 Gene3D - 116 247 - -
Bpe02g01154 303 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 35 300 IPR014476 GO:0003680
Bpe02g01154 303 SUPERFAMILY AF0104/ALDC/Ptd012-like 114 241 - -
Bpe02g01154 303 CDD DUF296 117 229 IPR005175 -
Bpe02g01154 303 MobiDBLite consensus disorder prediction 238 265 - -
Bpe02g01154 303 MobiDBLite consensus disorder prediction 1 109 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01154 Bpe-Chr2:15141118 Bpe11g00699 Bpe-Chr11:5379086 1.88E-53 dispersed
Bpe14g00488 Bpe-Chr14:4358975 Bpe02g01154 Bpe-Chr2:15141118 1.06E-169 wgd
Bpe02g00138 Bpe-Chr2:951701 Bpe02g01154 Bpe-Chr2:15141118 1.65E-116 wgd
Bpe02g01154 Bpe-Chr2:15141118 Bpe04g00419 Bpe-Chr4:2705796 1.60E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01154 - - zju:107421268 378.252