Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01156 ATGGCATCCAAAGACGCGGCGAGACTCCGATTCTTGTCGAACTTAGCCTCCCAGAAGACTGTTTCAGCTCCTATTGCTTCCGGCCAGCAGGTCCTAAACATTGGAAACTACGTCGTCCGAGTCAGACTGGGTACCCCGGGGCAGTTGATGTTCATGGTTTTAGACACCAGCAACGACGTCTCTTGGGTCCCCTGTTCCGGTTGTGCCGGCTGCTCCGCCGGACCCAGTTTCTCACCCACTACGTCTTCCACTTACGGACTACTTGACTGCTCTAATCCTCAGTGTACTCAAGTCCGGGGTCTCACCTGCCTCTCAGAGGGGTCCGCCGGCTGTCTTTTCAACCAATCCTACGGCGGTGATTCATCGTTCTCCGCCTCCCTCGTACAAGACTCGTTAGAATTGGCCAACGACGTCGTTCCAAATTACGCGTTCGGCTGCATAAACTCCGTCTCGGGTGGGCACATTCCTCCCCAAGGGCTGTTGGGTTTGGGCCGTGGACCCTTGTCCTTGCTCTCCCAATCCGGATCGCTGTACTCCGGCGTGTTCTCCTATTGTTTACCGAGTTACAAATCTTACTACTTTTCCGGGTCCCTCAAACTCGGGCCCTCGGGTCAACCCAAGAACATCAAGACCACCCCGCTCCTCCGAAACCCTCGTAGACCATCCCTCTACTTCGTCAATCTCACCGGAGTAAGCGTTGGCCGTGTTCTTGTGCCCATCGCTCCAGAGCTTCTAGCTTTGGACCCGAGCACTGGATCCGGAACCATAATTGATTCGGGAACGGTCATAACCCGATTCGTGCCACTCATTTACGTGGCGATCAGGGACGAGTTCAGAAAACAAGTCACCGGTGATTTTACAACGATGGGAGCGTTTGACACGTGTTTCTATCCTTCAAACGAACAATCAGCTCCGATTATCACTCTTCATTTCACTGGTTTGGATTTGAAGTTGCCAATGGAGAACAGTTTGATCCATAGTAGTGCTGGGTCTTTAGCTTGCCTGTCCATGGCGGCGGCGCCTAACAACGTGAACTCAGCTTTAAACGTTATAGCCAATTTGCAGCAGCAAAACCTTCGTATTCTGTTCGATGTGGAAAACTCTCGCTTGGGAATTTCCCGTGAGATCTGTAATTAA 1137 52.24 MASKDAARLRFLSNLASQKTVSAPIASGQQVLNIGNYVVRVRLGTPGQLMFMVLDTSNDVSWVPCSGCAGCSAGPSFSPTTSSTYGLLDCSNPQCTQVRGLTCLSEGSAGCLFNQSYGGDSSFSASLVQDSLELANDVVPNYAFGCINSVSGGHIPPQGLLGLGRGPLSLLSQSGSLYSGVFSYCLPSYKSYYFSGSLKLGPSGQPKNIKTTPLLRNPRRPSLYFVNLTGVSVGRVLVPIAPELLALDPSTGSGTIIDSGTVITRFVPLIYVAIRDEFRKQVTGDFTTMGAFDTCFYPSNEQSAPIITLHFTGLDLKLPMENSLIHSSAGSLACLSMAAAPNNVNSALNVIANLQQQNLRILFDVENSRLGISREICN 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15166775 15167911 + Bpe009018.1 Bpe02g01156 99305

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01156 378 Gene3D Acid Proteases 202 378 IPR021109 -
Bpe02g01156 378 Gene3D Acid Proteases 12 201 IPR021109 -
Bpe02g01156 378 Pfam Xylanase inhibitor C-terminal 224 373 IPR032799 -
Bpe02g01156 378 PANTHER ASPARTYL PROTEASE-RELATED 1 378 IPR001461 GO:0004190|GO:0006508
Bpe02g01156 378 SUPERFAMILY Acid proteases 33 377 IPR021109 -
Bpe02g01156 378 ProSiteProfiles Peptidase family A1 domain profile. 37 373 IPR033121 -
Bpe02g01156 378 PANTHER ASPARTYL PROTEASE AED3 1 378 - -
Bpe02g01156 378 Pfam Xylanase inhibitor N-terminal 37 201 IPR032861 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01156 - - - zju:107421291 579.711
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01156 Bpe-Chr2:15166775 Bpe15g00987 Bpe-Chr15:19423345 3.29E-140 dispersed
Bpe02g01156 Bpe-Chr2:15166775 Bpe04g00950 Bpe-Chr4:6406980 5.94E-59 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g496 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe02g01156 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012953 0 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g01156 Bpe_Chr02 FPKM 0.0 0.0 0.0 0.137602 0.0 0.0 0.0 0.093976 0.0 0.088231