Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01158 ATGACGAATCGAAATGAACCAACTCAGGAGTATGCAGGCGGCGCTCCTCCTCCTCCTCCTCCTCTCCCTCCTCCACCATCATCTAGCCTATCACGGGATCAACCTGATAGTTTACACCACCGTGGTGGAAATATGGTTTTTAAGAGCGGACCGCTTTTTTTATCATCCAAAGGAATTGGATGGACATCCTGGAAGAAAAGGTGGTTTATTCTGACGAGTACTTCCTTGGTTTTCTTCAGAAGTGATCCAAGTGCTGTTCCGCAAAAGGGGGGCGAGGTAAATTTAACCCTTGGTGGCATCGACCTCAACAATTCAGGCAGTGTTGTTGTCAAAGCAGATAAAAAACTCTTAACTGTGTTGTTTCCTGATGGTCGCGATGGTCGAGCTTTCACTCTTAAGGCTGAAACATTGGAAGATCTACAAGAATGGAAGGCAGCACTAGAGAATGCTCTTGCACAAGCACCAAGTGCTGGTCACTCAATGGGTCAAAATGGTGTCTTCAAGAATGATCAAACTGAGTCACTGGATGGGACTTCAGATCAATTAAAGAATAGGCAGCCTGCAAGATCTACTGTCCTTGGACGACCTCTTTTACTTGCTCTGGAAGATGTCGATGGAACACCCTCTTTTTTGGAGAAAGCTCTAAAGTTTATGGAAGAACACGGAGTCAAAGTGGAAGGAATTTTGAGGCAAGCTGCAGATGTTGACGACGTTGAACGTCGAATTCGGGAATATGAACAGGGAAAAAATGAGTTTTCTCCTGAAGAGGATGCACATGTTATTGGTGATTGTGTGAAGTATGTTCTTCGGGAATTGCCTTCATCTCCAGTTCCAGCATCTTGCTGCAATGCATTACTCGAAGCATGTCGGACTGATCGAGGTGTAAGAGTAAATGCTATGCGAACAGCAATATATGAAACATTCCCTGAACCAAATCGCCGCTTGCTTCAGAGAATACTTATGATGATGCAAAGTGTGGCTGCTCACAAAGCTGAGAATCGAATGAGCACTTCTGCTGTTGCAGCTTGCATGGCACCCTTACTTCTCCGTCCCCTCTTATCTGGAGATTGTGAAATTGAATCTGATTTCAATGTGGGGGGAGATGGCTCTATTCAACTTCTGCAAGCAGCTGCTGCAGCCAACCATGCTCAAGCCATAGTTATAACATTATTGGAGGAGTATAATAGTATATTTGGGTGTTTACAGGAAGGTTCCATGTCCCCAGAATTGTACTCTGACACAGAAGACAGTGGAAGCGAGAGCGGAGAAGGTACTGATGATGAGTTGTCCTATGATGACGAAGATCAAGAATATACATCAGGTTCCGATTCCATAGATGATGAAGATGCAACAAGTGAAACTTGCAGTGAGGATGCTAATTCTGAACATAACGATTTATATGATGATAAGGATTCACATGGCTCAACCTTCATTTCCAAGTCTGTATATGATAAAACTAAATCCAATCGTGAAACTCTGCCGTACCAAATTGATAAAGATCATACTACAGAAAATGTTCTTAATTCAAATATTCAGGACAACAAGTTTACTGAAGCATTAGGAGACGTTTCTAGAGATGCAAGCTTAATCCATAGGTCATTTGATCGTGATCCTTCTTCCCACATCCAACATTCTGCAACCATGTCTAATGGAAATGATTACAAATCAAGGCGGCGAACTGTTTGGGGACGTACTGCGGCAAAGAAGAACCTTTCTATGGAATCAATTGATTATTCCTTCGAAGATGAGGTTGAGATCCAGCAATTTGAGGCCAGAAAACGTGAATTGCAAAATAAAATTGCAGAGGAGGTTAAGGAGAATGCAATTCTCCAAGTTGGTCTAGAAAGACGGAAGAAGGCCCTTCATGAACACCGCCAAGCACTAGAGCAAGATGTAGCAAAACTACAAGAACGGTTGCAGAAAGAGAGGGATTTGAGAGCAGCTCTTGAAGCGAGACTCAAAGGATCTCAAGTTCCTTTGCCCAGCTTAGCAAATATTGATGAAAAGACTAAGGCAGAGCTCGAAGAAATATCGATGTTGGAGGTAGAAATTGTCAATTTGAAGCAAAAGATGGATGGGCTTGTAGTGCAGCTTGATCAGCAACATCAAACAAAAAAAGATAAACAAATGGATGCTGACGTAATACACCAGCCTTTTTTTGAAAGGTCCAAAAGTAAGGAAACTAATTTAGATAAAAAGGGAAATGAAAATCAGAGGAAGCTCGAACCTGCACTCATCTCAAGTAAGAATCCACCTCAGAACCAAAATCTGAATTCAGTTCGTAATTCTGTTGGGGTTCCAATTGAATTTTGTGCAGCAGAACCAGAACACGGGAGGTATAATGCTCCAGTCATTTCCAAGAGGAGTAGTATCAGGGGTGAGGGCGCCAATTCGACAAGTTCTGCATTGACAAAGTTGACTACCAGGCTAAACTTTTTGAAAGAACGTCGCAGTCAGATAGCGAATGAACTCCAAAATATGGACAAAGTCCGAGTTTCAAGTCGGTCTTTTGAAAACATTGAGAAAAACAAAGGATCAGAGGCAGACATTTCCATCCAAATTTCAGAAAACTCTCATGGATCGGCTGCTCAATCTATCCAAAACCGAGAAAAAGGTAGAACGTTAGACTATTTTCAATCCCTCCAGACCTCAGAAAATGAAGTAGTAAATTCCGAAGATACGAGAAAATCATACACAGACGTAGGAAAGAGGTCAGAGGGTCGGCGTCTGCAGAGTTTGGAGAGAGGGAAATCTGACACTTATCCGACAGACAAAGTAGATGACTGA 2787 42.45 MTNRNEPTQEYAGGAPPPPPPLPPPPSSSLSRDQPDSLHHRGGNMVFKSGPLFLSSKGIGWTSWKKRWFILTSTSLVFFRSDPSAVPQKGGEVNLTLGGIDLNNSGSVVVKADKKLLTVLFPDGRDGRAFTLKAETLEDLQEWKAALENALAQAPSAGHSMGQNGVFKNDQTESLDGTSDQLKNRQPARSTVLGRPLLLALEDVDGTPSFLEKALKFMEEHGVKVEGILRQAADVDDVERRIREYEQGKNEFSPEEDAHVIGDCVKYVLRELPSSPVPASCCNALLEACRTDRGVRVNAMRTAIYETFPEPNRRLLQRILMMMQSVAAHKAENRMSTSAVAACMAPLLLRPLLSGDCEIESDFNVGGDGSIQLLQAAAAANHAQAIVITLLEEYNSIFGCLQEGSMSPELYSDTEDSGSESGEGTDDELSYDDEDQEYTSGSDSIDDEDATSETCSEDANSEHNDLYDDKDSHGSTFISKSVYDKTKSNRETLPYQIDKDHTTENVLNSNIQDNKFTEALGDVSRDASLIHRSFDRDPSSHIQHSATMSNGNDYKSRRRTVWGRTAAKKNLSMESIDYSFEDEVEIQQFEARKRELQNKIAEEVKENAILQVGLERRKKALHEHRQALEQDVAKLQERLQKERDLRAALEARLKGSQVPLPSLANIDEKTKAELEEISMLEVEIVNLKQKMDGLVVQLDQQHQTKKDKQMDADVIHQPFFERSKSKETNLDKKGNENQRKLEPALISSKNPPQNQNLNSVRNSVGVPIEFCAAEPEHGRYNAPVISKRSSIRGEGANSTSSALTKLTTRLNFLKERRSQIANELQNMDKVRVSSRSFENIEKNKGSEADISIQISENSHGSAAQSIQNREKGRTLDYFQSLQTSENEVVNSEDTRKSYTDVGKRSEGRRLQSLERGKSDTYPTDKVDD 928
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15198037 15215734 - Bpe009020.1 Bpe02g01158 99307

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01158 928 MobiDBLite consensus disorder prediction 883 928 - -
Bpe02g01158 928 MobiDBLite consensus disorder prediction 419 455 - -
Bpe02g01158 928 Coils Coil 618 652 - -
Bpe02g01158 928 MobiDBLite consensus disorder prediction 889 928 - -
Bpe02g01158 928 MobiDBLite consensus disorder prediction 1 42 - -
Bpe02g01158 928 MobiDBLite consensus disorder prediction 841 870 - -
Bpe02g01158 928 Pfam PH domain 47 151 IPR001849 -
Bpe02g01158 928 SMART PH_update 46 154 IPR001849 -
Bpe02g01158 928 Coils Coil 803 830 - -
Bpe02g01158 928 SUPERFAMILY PH domain-like 17 152 - -
Bpe02g01158 928 Coils Coil 586 606 - -
Bpe02g01158 928 Coils Coil 670 697 - -
Bpe02g01158 928 MobiDBLite consensus disorder prediction 718 737 - -
Bpe02g01158 928 Gene3D - 36 153 IPR011993 -
Bpe02g01158 928 MobiDBLite consensus disorder prediction 846 870 - -
Bpe02g01158 928 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1-LIKE ISOFORM X1 3 851 - -
Bpe02g01158 928 CDD PH 48 147 - -
Bpe02g01158 928 MobiDBLite consensus disorder prediction 408 472 - -
Bpe02g01158 928 ProSiteProfiles Rho GTPase-activating proteins domain profile. 199 398 IPR000198 GO:0007165
Bpe02g01158 928 ProSiteProfiles PH domain profile. 45 152 IPR001849 -
Bpe02g01158 928 CDD RhoGAP 208 360 - -
Bpe02g01158 928 SUPERFAMILY GTPase activation domain, GAP 207 399 IPR008936 GO:0007165
Bpe02g01158 928 Pfam Leucine-zipper of ternary complex factor MIP1 621 701 IPR025757 -
Bpe02g01158 928 Gene3D Rho GTPase activation protein 176 400 IPR008936 GO:0007165
Bpe02g01158 928 Pfam RhoGAP domain 208 351 IPR000198 GO:0007165
Bpe02g01158 928 MobiDBLite consensus disorder prediction 156 188 - -
Bpe02g01158 928 MobiDBLite consensus disorder prediction 456 472 - -
Bpe02g01158 928 MobiDBLite consensus disorder prediction 12 30 - -
Bpe02g01158 928 SMART RhoGAP_3 205 395 IPR000198 GO:0007165
Bpe02g01158 928 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 3 851 - -
Bpe02g01158 928 Coils Coil 133 153 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01158 - - - zju:107421309 1000.73
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01158 Bpe-Chr2:15198037 Bpe08g01192 Bpe-Chr8:13624712 0 dispersed
Bpe02g01158 Bpe-Chr2:15198037 Bpe11g00943 Bpe-Chr11:6982404 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g493 . . . . . . . . . Cmo12g00147 . . . Car12g00172 . . Cpe07g00160 . . . . . . . . . . . . . . Cone4ag1303 . . . . . . . . . . . Bpe02g01158 . . . . . . Cma12g00190 . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003403 0 1 1 0 1 1 2 1 2 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 12 4 1 47
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g01158 Bpe_Chr02 FPKM 51.104847 51.679977 80.990974 83.498611 45.208897 41.56221 47.683395 72.574043 70.296997 81.482002