Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01167 ATGAACAGCCTTTGCTCGGCTGACTGGAGCTTCGATCCATTTTATGAAACCTCGCCCAGTTTTCCTCCACATTCGTTCGAACAAAACTTCACCAGCTTTCCTCTGCTGGACAAAGCCTGCTGCTACCCTTCAGCGATCGATTTATCAGCTCTGCAAAAAGATGACTCTTTCCATCGTACCCTTCACACACCCCCGATTTCTAATCTGGACGATGAAGATGAACTATGTCTACTTCCCTTTGAAGCCTCTTGCAAAGTGGAAGCAGTTCCAACGCCAGAAGGGAAAGTTCGGACGAAGAAGTTGCAGAGAAAGCCATCGAAGAATCTGATGGCCGAGCGAAGACGACGAAAGCGACTGAATGACAGGCTAACTATGCTAAGATCCATTGTCCCTAAGATTAGCAAGCGAATGTTAATCCGAGTTTTTCCTCTTAATCTCCGAACATTGGCAATGGAGGTGGAAGAAAGAAACGGGGAAACTCGGATTACGATTTGCTGCTCAGGAAAGCCTGGTTTATTATCATTAACGGTGAATATCCTCGACGCTTTAGGACTCGAGGTTAATGAGTGTGTGATTAGCTCCTTCAACGACTTCACAATGCATGCTTCTTGTTCGCAGGTAAATAAAAAAGAATCTCTTCTTTCTGTTCAAGTTCTGGGTTTTGTTTTAATGGGGGTGAAAACAGGAATTGAAGCAGGGTATAAAGGCTGCTACTGA 717 44.77 MNSLCSADWSFDPFYETSPSFPPHSFEQNFTSFPLLDKACCYPSAIDLSALQKDDSFHRTLHTPPISNLDDEDELCLLPFEASCKVEAVPTPEGKVRTKKLQRKPSKNLMAERRRRKRLNDRLTMLRSIVPKISKRMLIRVFPLNLRTLAMEVEERNGETRITICCSGKPGLLSLTVNILDALGLEVNECVISSFNDFTMHASCSQVNKKESLLSVQVLGFVLMGVKTGIEAGYKGCY 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15355453 15356427 + Bpe009029.1 Bpe02g01167 99316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01167 238 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 151 216 - -
Bpe02g01167 238 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 80 135 - -
Bpe02g01167 238 CDD ACT_UUR-ACR-like 160 200 - -
Bpe02g01167 238 Gene3D - 94 183 IPR036638 GO:0046983
Bpe02g01167 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 105 138 IPR036638 GO:0046983
Bpe02g01167 238 PANTHER HELIX-LOOP-HELIX, PUTATIVE, EXPRESSED-RELATED 80 135 - -
Bpe02g01167 238 Pfam Helix-loop-helix DNA-binding domain 109 132 IPR011598 GO:0046983
Bpe02g01167 238 PANTHER HELIX-LOOP-HELIX, PUTATIVE, EXPRESSED-RELATED 151 216 - -
Bpe02g01167 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 103 183 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01167 Bpe14g00498 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01167 Bpe-Chr2:15355453 Bpe11g01470 Bpe-Chr11:10940220 3.65E-11 dispersed
Bpe14g00498 Bpe-Chr14:4422751 Bpe02g01167 Bpe-Chr2:15355453 3.97E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20951 PF00010 HLH 6.80E-06 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01167 - - qsu:111997607 169.088