Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01182 | ATGGCTGCTGAAGCTCGACATTCAGAAACTGAGAGCACCTCGAATTCTAACTTCAACTCTTCCTCATCCCCACCATCGTCCCCTTCTTCGACACCCTCCACTCACTCTCTTCAGGACACTCTTTCTAACCCTGATTTTTCTTCGTCGGAACAGAAGAACAAGCGAATGAGAGATACCAGCAGGCACCCACTTTTCAGAGGCGTTCGGATGCGCAGTTGGGGCAAATGGGTGTCTGAAATTCGAGAGCCTCGCAAGAAATCGCGCATTTGGCTCGGAACTTTCCCGACGCCGGAAATGGCTGCCAGAGCTCACGACGTCGCCGCTTTAAGCATCAAAGGTAATTCCGCAATTCTTAACTTCCCCGACCTCGTTGACTCTCTTCCACGCCCGGTATCTCTCGCTCCTAGAGATGTCCAAGCGGCAGCAGTGAAGGCAGCTCAGATGTACAAATTTGAGTCGGCATCTTCGACGCCGTCATTGTCGTCGTTAGTTTCGGCGGCGTCGACGGAGAACGAATCTGACGATTTGGGGGAGATCGTTGAGCTGCCAAGCTTAGGAACGAGTTACGAGTCGAACGAGTTGAGGAACGAAATCGTGTTGATGGACTCAGGGGATGGGTGGTTATACCAACCGCCATGGTTGCAAAGCTTGGAGGATAGTGGATTCAACAATGCGAGCGAGGAGTTGACTGCCGGAAGTTGCGGTTTGATAGCCGGCGGTTTTGAGAGTTTGCTTTGGGAGTATTGA | 747 | 51.94 | MAAEARHSETESTSNSNFNSSSSPPSSPSSTPSTHSLQDTLSNPDFSSSEQKNKRMRDTSRHPLFRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPDLVDSLPRPVSLAPRDVQAAAVKAAQMYKFESASSTPSLSSLVSAASTENESDDLGEIVELPSLGTSYESNELRNEIVLMDSGDGWLYQPPWLQSLEDSGFNNASEELTAGSCGLIAGGFESLLWEY | 248 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 15488200 | 15488946 | + | Bpe009043.1 | Bpe02g01182 | 99331 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01182 | 248 | PRINTS | Ethylene responsive element binding protein signature | 65 | 76 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g01182 | 248 | PRINTS | Ethylene responsive element binding protein signature | 87 | 103 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g01182 | 248 | CDD | AP2 | 63 | 123 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g01182 | 248 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
Bpe02g01182 | 248 | Pfam | AP2 domain | 63 | 113 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g01182 | 248 | Gene3D | AP2/ERF domain | 64 | 122 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe02g01182 | 248 | ProSiteProfiles | AP2/ERF domain profile. | 64 | 121 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g01182 | 248 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 9 | 247 | - | - | |
Bpe02g01182 | 248 | MobiDBLite | consensus disorder prediction | 7 | 49 | - | - | |
Bpe02g01182 | 248 | SUPERFAMILY | DNA-binding domain | 64 | 122 | IPR016177 | GO:0003677 | |
Bpe02g01182 | 248 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE | 9 | 247 | - | - | |
Bpe02g01182 | 248 | SMART | rav1_2 | 64 | 127 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01182 | Bpe-Chr2:15488200 | Bpe08g00494 | Bpe-Chr8:3241344 | 3.12E-62 | dispersed | |
Bpe14g00516 | Bpe-Chr14:4538438 | Bpe02g01182 | Bpe-Chr2:15488200 | 4.50E-112 | wgd | |
Bpe02g00170 | Bpe-Chr2:1171933 | Bpe02g01182 | Bpe-Chr2:15488200 | 1.49E-76 | wgd | |
Bpe02g01182 | Bpe-Chr2:15488200 | Bpe04g00398 | Bpe-Chr4:2498008 | 8.56E-77 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20952 | PF00847 | AP2 | 2.20E-13 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01182 | K09286 | - | zju:107420677 | 273.863 |