Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01227 | ATGCCTGTAAAAGCAGCGCAATCGTCATATAGGGATCGAACACAAGAATTCCAGACGGTTGCAGAGAGACTGAAGAAGTCTTTCTCATCATCTTCTGAGCAAAATGGGCAGAGTAATGGTTTGAAATTAGAGGATCAGCGATCTGCAGTGGCAATTCAGTCGGAATTTAATAACAGAGCTTCCAAAATTGGGTATGGAATACACCAGACGTCGCTAAAACTTTCAAAGCTGGCTAAGTTGGCAAAGAGGACATCAGTTTTTGATGATCCCACCGTGGAAATTCAGGAATTGACAGCTGTTATCAAGCAAGATATTACTGCACTGAACTCTGCAGTCGTTGACCTTCAGCTGCTTTCCCATTCCAGAAATGATAGTGGGAATGTCTCCAGTGATACAACTAGTCATTCAACCACTGTTGTAGATGACCTGAAGAATCGGTTAATGAGTGCTACAAAAGAATTCAAAGAAGTCCTTACCATGCGTACAGAGAACTTGAAGGTTCATGAAAACAGAAGACAATTGTTTTCTTCCACCGCTTCCAAAGATTCTGCCAATCCTTTTGTTCGTCAGCGCCCATTAGTTTCCAGGTCAGCAGCTAGCACATCAAATGCTCCTCCTCCATGGGCAAATGGATCAACATCCTCGTCCCAGTCATTTAATAGAAAGCAGGCAGATGGGGAGAGTCAGCCACTACTCCAACAGCAGCAGCAACAACAACAGCAGTTGGTTCCATTGCAGGACAATTACATGCAGAGCAGGGCTGAAGCTCTGCAAAATGTTGAGTCCACTATTCATGAGCTGAGCAGCATTTTCAATCAGCTCGCAACCCTTGTGTCCCAACAAGGAGAAATTGCCATAAGGATTGATGAGAACATGGATGACACTTTGGCAAATGTAGAGGGAGCACAGGGAGCTCTTCTCAAGTATTTAAACAGCATATCTTCGAATAGGTGGCTGATGATAAAAATATTCTTCGTGTTAATATTTTTCCTTATGGTTTTCCTATTTTTCGTGGCATAG | 1020 | 43.04 | MPVKAAQSSYRDRTQEFQTVAERLKKSFSSSSEQNGQSNGLKLEDQRSAVAIQSEFNNRASKIGYGIHQTSLKLSKLAKLAKRTSVFDDPTVEIQELTAVIKQDITALNSAVVDLQLLSHSRNDSGNVSSDTTSHSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVHENRRQLFSSTASKDSANPFVRQRPLVSRSAASTSNAPPPWANGSTSSSQSFNRKQADGESQPLLQQQQQQQQQLVPLQDNYMQSRAEALQNVESTIHELSSIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 15907745 | 15909887 | + | Bpe009085.1 | Bpe02g01227 | 99376 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01227 | 339 | PANTHER | SYNTAXIN-32-LIKE | 2 | 338 | - | - | |
Bpe02g01227 | 339 | Pfam | SNARE domain | 283 | 335 | IPR000727 | - | |
Bpe02g01227 | 339 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 247 | 309 | IPR000727 | - | |
Bpe02g01227 | 339 | MobiDBLite | consensus disorder prediction | 194 | 237 | - | - | |
Bpe02g01227 | 339 | ProSitePatterns | Syntaxin / epimorphin family signature. | 253 | 292 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 | |
Bpe02g01227 | 339 | SMART | tSNARE_6 | 242 | 309 | IPR000727 | - | |
Bpe02g01227 | 339 | SUPERFAMILY | t-snare proteins | 54 | 302 | IPR010989 | GO:0016020|GO:0016192 | |
Bpe02g01227 | 339 | Gene3D | - | 51 | 302 | - | - | |
Bpe02g01227 | 339 | Pfam | Syntaxin-5 N-terminal, Sly1p-binding domain | 7 | 26 | IPR021538 | - | |
Bpe02g01227 | 339 | MobiDBLite | consensus disorder prediction | 193 | 237 | - | - | |
Bpe02g01227 | 339 | PANTHER | SYNTAXIN | 2 | 338 | IPR045242 | - | |
Bpe02g01227 | 339 | MobiDBLite | consensus disorder prediction | 24 | 44 | - | - | |
Bpe02g01227 | 339 | CDD | SNARE_syntaxin5 | 250 | 328 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe15g01148 | Bpe-Chr15:20432813 | Bpe02g01227 | Bpe-Chr2:15907745 | 5.63E-93 | transposed | |
Bpe14g00562 | Bpe-Chr14:4797051 | Bpe02g01227 | Bpe-Chr2:15907745 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01227 | K08490 | - | jre:109009619 | 480.33 |