Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01227 ATGCCTGTAAAAGCAGCGCAATCGTCATATAGGGATCGAACACAAGAATTCCAGACGGTTGCAGAGAGACTGAAGAAGTCTTTCTCATCATCTTCTGAGCAAAATGGGCAGAGTAATGGTTTGAAATTAGAGGATCAGCGATCTGCAGTGGCAATTCAGTCGGAATTTAATAACAGAGCTTCCAAAATTGGGTATGGAATACACCAGACGTCGCTAAAACTTTCAAAGCTGGCTAAGTTGGCAAAGAGGACATCAGTTTTTGATGATCCCACCGTGGAAATTCAGGAATTGACAGCTGTTATCAAGCAAGATATTACTGCACTGAACTCTGCAGTCGTTGACCTTCAGCTGCTTTCCCATTCCAGAAATGATAGTGGGAATGTCTCCAGTGATACAACTAGTCATTCAACCACTGTTGTAGATGACCTGAAGAATCGGTTAATGAGTGCTACAAAAGAATTCAAAGAAGTCCTTACCATGCGTACAGAGAACTTGAAGGTTCATGAAAACAGAAGACAATTGTTTTCTTCCACCGCTTCCAAAGATTCTGCCAATCCTTTTGTTCGTCAGCGCCCATTAGTTTCCAGGTCAGCAGCTAGCACATCAAATGCTCCTCCTCCATGGGCAAATGGATCAACATCCTCGTCCCAGTCATTTAATAGAAAGCAGGCAGATGGGGAGAGTCAGCCACTACTCCAACAGCAGCAGCAACAACAACAGCAGTTGGTTCCATTGCAGGACAATTACATGCAGAGCAGGGCTGAAGCTCTGCAAAATGTTGAGTCCACTATTCATGAGCTGAGCAGCATTTTCAATCAGCTCGCAACCCTTGTGTCCCAACAAGGAGAAATTGCCATAAGGATTGATGAGAACATGGATGACACTTTGGCAAATGTAGAGGGAGCACAGGGAGCTCTTCTCAAGTATTTAAACAGCATATCTTCGAATAGGTGGCTGATGATAAAAATATTCTTCGTGTTAATATTTTTCCTTATGGTTTTCCTATTTTTCGTGGCATAG 1020 43.04 MPVKAAQSSYRDRTQEFQTVAERLKKSFSSSSEQNGQSNGLKLEDQRSAVAIQSEFNNRASKIGYGIHQTSLKLSKLAKLAKRTSVFDDPTVEIQELTAVIKQDITALNSAVVDLQLLSHSRNDSGNVSSDTTSHSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVHENRRQLFSSTASKDSANPFVRQRPLVSRSAASTSNAPPPWANGSTSSSQSFNRKQADGESQPLLQQQQQQQQQLVPLQDNYMQSRAEALQNVESTIHELSSIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15907745 15909887 + Bpe009085.1 Bpe02g01227 99376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01227 339 PANTHER SYNTAXIN-32-LIKE 2 338 - -
Bpe02g01227 339 Pfam SNARE domain 283 335 IPR000727 -
Bpe02g01227 339 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 247 309 IPR000727 -
Bpe02g01227 339 MobiDBLite consensus disorder prediction 194 237 - -
Bpe02g01227 339 ProSitePatterns Syntaxin / epimorphin family signature. 253 292 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bpe02g01227 339 SMART tSNARE_6 242 309 IPR000727 -
Bpe02g01227 339 SUPERFAMILY t-snare proteins 54 302 IPR010989 GO:0016020|GO:0016192
Bpe02g01227 339 Gene3D - 51 302 - -
Bpe02g01227 339 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 7 26 IPR021538 -
Bpe02g01227 339 MobiDBLite consensus disorder prediction 193 237 - -
Bpe02g01227 339 PANTHER SYNTAXIN 2 338 IPR045242 -
Bpe02g01227 339 MobiDBLite consensus disorder prediction 24 44 - -
Bpe02g01227 339 CDD SNARE_syntaxin5 250 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g01148 Bpe-Chr15:20432813 Bpe02g01227 Bpe-Chr2:15907745 5.63E-93 transposed
Bpe14g00562 Bpe-Chr14:4797051 Bpe02g01227 Bpe-Chr2:15907745 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01227 K08490 - jre:109009619 480.33