Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01228 | ATGGATGTTCCCCCCTTGGAACACAGTGAAACGGAAACTTACCCTTTAATAATGGAAAGATCAGAAAATCTTAACAACACTGAACACATTGTGGACATATTAGATACTGCTGATACTTCATCATCAAGGTTGTCTCATGATCGACAGTACACTGGGTCAAATGCATCACAGATTGAAGATAGACCTTCAAGCAGTACACGAGTGCCTACATCTGAACCACCAATGGCTCTTAATGGATCAAACTCTCGGAATTCCTCATTCATTAGGAGAGGGAACACACGTCGTCGTCAGAGTCCATTGAATTCCAGTTTATGGATATCTATTGAACTTGTTCTTACTCTAAGTCAGATTGTTGCAGCTGTTGTTGTTTTGTCATTGTCGAGGCATGAGCATCCACGTGCCCCATTGTTTCAGTGGATTGTGGGATACGCATCTGGTTGTGTCGCTACCCTCCCTCTTCTCTACTGGCGTTATAGGCATCGTAACCAGGCTTTAGAGCAGGATTCATCTCAATCTCGCCAGAATTCTACTCAAGTTTCTCTTTCAGCTTCTAGGACATCAGAATGGGAAGATCGCCAAACTGCTGTCTCTCCTCCTACTAACAATCAAAGTTCTGGTGCACTTAGTGCGAGGCTGAAGATATGGGTAGAATATTTTAAGATGGGCTTGGATTGTTTTTTTGCTGTTTGGTTTGTAGTTGGCAATGTGTGGATCTTTGGAGGGCACTCGTCAGCCTCTGAGTCTCCTAACTTGTACAGGTTATGTATAGTTTTTCTTACCTTTAGCTGTATCGGATATGCAATGCCCTTCATTCTATGCGTGACCATCTGCTGTTGTCTGCCCTGTATAATTTCCATCCTTGGGTTTCGAGAAGATCTGTCACAAACTAGGGGTGCCACTACTGAATCAATCGATGCTTTGCCTACATACAAATTCAAGGTGAAGAAAGGTAAAAGTGGGGATGAAAACAACTCAGGTGGTGGTGAAGGTGGGATTGTGGCTGCTGGAACGGAAAAGGAACGCGTTATTTCTGGTGAAGATGCTGTTTGTTGCATCTGCCTGGCTAAATACTCCAACAATGATGAATTGAGAGAGTTGCCATGTTCTCACTTCTTTCACAAGGATTGTGTGGATAAATGGCTGAAGATCAACGCTTTATGTCCTCTCTGCAAGACAGAGGTTGGTGAGAGCATCATAGGCTCACTCAACGGCTCAAGTGCTAACCACCACCCAGGCAATAATAGGGCTGAGACCACCTTGACCCTGTTTTAA | 1272 | 43.95 | MDVPPLEHSETETYPLIMERSENLNNTEHIVDILDTADTSSSRLSHDRQYTGSNASQIEDRPSSSTRVPTSEPPMALNGSNSRNSSFIRRGNTRRRQSPLNSSLWISIELVLTLSQIVAAVVVLSLSRHEHPRAPLFQWIVGYASGCVATLPLLYWRYRHRNQALEQDSSQSRQNSTQVSLSASRTSEWEDRQTAVSPPTNNQSSGALSARLKIWVEYFKMGLDCFFAVWFVVGNVWIFGGHSSASESPNLYRLCIVFLTFSCIGYAMPFILCVTICCCLPCIISILGFREDLSQTRGATTESIDALPTYKFKVKKGKSGDENNSGGGEGGIVAAGTEKERVISGEDAVCCICLAKYSNNDELRELPCSHFFHKDCVDKWLKINALCPLCKTEVGESIIGSLNGSSANHHPGNNRAETTLTLF | 423 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 15913249 | 15915408 | - | Bpe009086.2 | Bpe02g01228 | 99377 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01228 | 423 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 333 | 398 | IPR013083 | - | |
Bpe02g01228 | 423 | MobiDBLite | consensus disorder prediction | 40 | 94 | - | - | |
Bpe02g01228 | 423 | Pfam | Ring finger domain | 350 | 391 | IPR001841 | - | |
Bpe02g01228 | 423 | ProSiteProfiles | Zinc finger RING-type profile. | 350 | 391 | IPR001841 | - | |
Bpe02g01228 | 423 | PANTHER | C3H4 TYPE ZINC FINGER PROTEIN | 8 | 408 | - | - | |
Bpe02g01228 | 423 | MobiDBLite | consensus disorder prediction | 167 | 205 | - | - | |
Bpe02g01228 | 423 | SMART | ring_2 | 350 | 390 | IPR001841 | - | |
Bpe02g01228 | 423 | SMART | ringv_2 | 349 | 391 | IPR011016 | GO:0008270 | |
Bpe02g01228 | 423 | PANTHER | C3H4 TYPE ZINC FINGER PROTEIN | 8 | 408 | - | - | |
Bpe02g01228 | 423 | SUPERFAMILY | RING/U-box | 342 | 397 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01228 | Bpe-Chr2:15913249 | Bpe07g00121 | Bpe-Chr7:869422 | 3.97E-50 | dispersed | |
Bpe05g00717 | Bpe-Chr5:20704160 | Bpe02g01228 | Bpe-Chr2:15913249 | 2.89E-12 | dispersed | |
Bpe07g00050 | Bpe-Chr7:422197 | Bpe02g01228 | Bpe-Chr2:15913249 | 6.89E-09 | dispersed | |
Bpe11g00597 | Bpe-Chr11:4542952 | Bpe02g01228 | Bpe-Chr2:15913249 | 4.10E-55 | transposed | |
Bpe10g00629 | Bpe-Chr10:13045507 | Bpe02g01228 | Bpe-Chr2:15913249 | 1.08E-132 | wgd | |
Bpe14g00565 | Bpe-Chr14:4815386 | Bpe02g01228 | Bpe-Chr2:15913249 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01228 | - | - | csv:101211818 | 607.446 |