Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01231 ATGGGTTCTTGCGAAAAAAGAGAAGAAAAGAAAGACAATTGTTTGAGGGTGAATGGGCCGATAATTGTAGGCGCGGGACCATCAGGGCTTGCCGCTTCCGCTTGCCTTTCTAAACATGGAGTTCCTTCATTGATTCTCGAGCAAAGTGACTGTGTTGCTTCTTTGTGGCAACACAGAACCTACGATCGCCTAAAGCTTCATCTTCCCAAGCATTTCTGCGAGCTACCATTAATGGGTTTCCCTAAAAATTTCCCAAAGTACCCAACAAAGGCCCAGTTCATCTCCTACATGGAATCATACGCTTCGCACTTCTCGATTCACCCTAGACTCAACGAAACAGTTCAATTAGCGGAGTTTGATTCCAGCGGATTTTGGAGAGTCCGTACTCAGAAGTTTGAGTACATTTCTCGGTGGCTCATCGTCGCCTCCGGCGAGAATGCGGAGATGGTGAAGCCGGAAATTGCTGGGATGGACAATTTTCGTGGAACTGTGATTCATACCAGTATGTATAAATCAGGTTCCGATTTCAAAGACAAGAGGGTCTTAGTAATTGGGTGTGGCAATTCCGGCATGGAAGTTAGTTTGGACCTTTGCAGACACAATGCTGCTACCCATATGGTTGTAAGAAACACTGTGCATGTTCTTCCGAGAGAAATGTTTGGTTTTTCAACGTTCGGAATCGCCACGAGACTCCTGAAATGGCTGCCATTAAGATTAGTCGACAAGTTTCTCCTTCTTGCTGCCTATCTCTTTCTGGGAGACACAGATCAGCTAGGCCTGCGGCGGCCAAAAACAGGTCCTATCGAACTCAAAAACGCCACCGGGAAAACACCAGTTCTCGACGTCGGAGCGCTCTCGCAGATAAAATCCGGGAAAATAAAGGTGATGGAAGGAGTTAAGGAAATCACCAGAAATGGAGCTAAATTTGTGGATTGGCAAGAGAAGGAATTCGATTCCATAATCTTAGCTACCGGCTACAGAAGCAATGTTCCCAAATGGCTCAAGGGTTCGGAGTTTTTCAACGACGACGGAATGCCGAGAAGGCCGTTTCCAAACGGGTGGAAAGGAGAGAATGGGCTGTACTGCGTGGGGTTCACGAGAAGAGGCCTGCTGGGAACGGGCTCTGACGCCGTTAAAATCGCCCAAGATATCGCTTATCAATGGAGGTCGGCAGCAAGGGTGGAGCAGGACCCCTGCTGCTGCTTCCCACATTAA 1215 47.9 MGSCEKREEKKDNCLRVNGPIIVGAGPSGLAASACLSKHGVPSLILEQSDCVASLWQHRTYDRLKLHLPKHFCELPLMGFPKNFPKYPTKAQFISYMESYASHFSIHPRLNETVQLAEFDSSGFWRVRTQKFEYISRWLIVASGENAEMVKPEIAGMDNFRGTVIHTSMYKSGSDFKDKRVLVIGCGNSGMEVSLDLCRHNAATHMVVRNTVHVLPREMFGFSTFGIATRLLKWLPLRLVDKFLLLAAYLFLGDTDQLGLRRPKTGPIELKNATGKTPVLDVGALSQIKSGKIKVMEGVKEITRNGAKFVDWQEKEFDSIILATGYRSNVPKWLKGSEFFNDDGMPRRPFPNGWKGENGLYCVGFTRRGLLGTGSDAVKIAQDIAYQWRSAARVEQDPCCCFPH 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15940868 15942415 - Bpe009090.1 Bpe02g01231 99380

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01231 404 Gene3D - 18 390 IPR036188 -
Bpe02g01231 404 SUPERFAMILY FAD/NAD(P)-binding domain 177 378 IPR036188 -
Bpe02g01231 404 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 11 393 - -
Bpe02g01231 404 Pfam Pyridine nucleotide-disulphide oxidoreductase 21 211 - -
Bpe02g01231 404 PRINTS FAD-dependent pyridine nucleotide reductase signature 180 198 - -
Bpe02g01231 404 PRINTS FAD-dependent pyridine nucleotide reductase signature 20 39 - -
Bpe02g01231 404 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Bpe02g01231 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 176 200 - -
Bpe02g01231 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 19 41 - -
Bpe02g01231 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 137 145 - -
Bpe02g01231 404 SUPERFAMILY FAD/NAD(P)-binding domain 21 280 IPR036188 -
Bpe02g01231 404 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 11 393 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01231 K11816 YUCCA; indole-3-pyruvate monooxygenase [EC:1.14.13.168] - zju:107431492 646.736
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01231 Bpe-Chr2:15940868 Bpe14g00534 Bpe-Chr14:4654913 2.72E-177 dispersed
Bpe14g00568 Bpe-Chr14:4834158 Bpe02g01231 Bpe-Chr2:15940868 0 wgd
Bpe02g01231 Bpe-Chr2:15940868 Bpe09g00414 Bpe-Chr9:6921852 2.58E-167 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g423 . . . . Bpe02g01231 . . . Cmo05g00687 Cmo12g00265 . Cma05g00655 . Car12g00294 . . . . . . . . . . . . . . . . . . . . . . . . Cme03g01659 . . . . . . . . . . . . Cma12g00313 . . Cpe11g00582 . . . . . . . . . . . . . . . Lsi08g01158 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007846 1 2 0 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 0 1 2 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g01231 Bpe_Chr02 FPKM 12.823345 13.350889 26.596497 28.006804 37.383461 39.272293 38.920067 12.999677 12.654504 11.307928