Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01233 ATGGAAGGCAGTAAAGACGGTAATGTTGACTGTGGGAGCTGCTCAAAGGAGGGTCTGCCTCCCAATCCTCTTGCGGCGGCCTATCGCCAGTGCCTTAGTACTGATCGTGTTCTACTGCCGTGTAAGAAATCGCTCGTACGACACCAGTCGCTTATGAAGACCAATGCATTGGACGTTACTCGTGAACCTGTATTCAACAAAGATAGCCGAGATTCTAACTTCATTCCACTGGTTCGCTCTGGAGCATGCACCGACATTGGGTTTCGTAGCAGCATGGAAGATGTATATGTTTGCATCGAAAAATTTACAAGTGCTGACCGGATTGAAAATTCTAATGATGGACCTAGGGCTTTCTATGGGGTTTTTGATGGCCATGGAGGGAAGCACGCTGCAGACTTTGCTTGTTACCATTTACCTAAATTCATAGTCGAGAATGAAGATTTCCCCAAGGATATTGAGAAGGCTGTTGCTTCAGCATTTCTTCAAACCGATACCGCCTTTGAGAAAGCTTATCAGTTAGTTTGTATTATAATCTTAGTTTCCAATGGCAGATCATTGGTAGTGGCAAATGCTGGAGACTGTCGAGCAGTTCTCTGTCGTCGTGGCAAAGCCATTGAAATGTCAAGGGATCACAAGCCCATTTGCATCAGAGAGAAGAACCGGATCGAGGCATCTGGAGGATATGTTGACGATGGTTATCTCAACGGACAACTTAATGTTGCTCGAGCTCTGGGAGACTGGCACGTGGAAGGAATGAAGGGTCGAGATGGTGGGCCTCTTAGTGCCGAGCCAGAGCTCATGTCTACAAAATTAACCGAGGAAGATGAGTTTCTGATAATAGGATGTGACGGAATATGGGATGTATTTAGGAGCCAAAATGCCGTCGATTTTGCAAGACGGAGGCTTCAAGAGCACAACGACCCAGACTTGTGTAGCAAGGATTTGATTGATGAGGCTTTGAAGAGAAAAAGCGGGGATAATTTAGCCGTGGTTGTGGTCTGTTTCCAATCTCCGCCTCCGCCAAATTTGGTCGCTCCTCGAACAAGAGTGCAGAGGAGCTTTTCTGCTGAAGGATTGAGAGAGTTGCAAAGCTTTCTTGACAGCTTGGAAAAAGTGACTAATTGA 1125 46.22 MEGSKDGNVDCGSCSKEGLPPNPLAAAYRQCLSTDRVLLPCKKSLVRHQSLMKTNALDVTREPVFNKDSRDSNFIPLVRSGACTDIGFRSSMEDVYVCIEKFTSADRIENSNDGPRAFYGVFDGHGGKHAADFACYHLPKFIVENEDFPKDIEKAVASAFLQTDTAFEKAYQLVCIIILVSNGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPICIREKNRIEASGGYVDDGYLNGQLNVARALGDWHVEGMKGRDGGPLSAEPELMSTKLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPDLCSKDLIDEALKRKSGDNLAVVVVCFQSPPPPNLVAPRTRVQRSFSAEGLRELQSFLDSLEKVTN 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15945062 15947139 + Bpe009092.1 Bpe02g01233 99382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01233 374 Gene3D - 58 338 IPR036457 -
Bpe02g01233 374 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Bpe02g01233 374 SUPERFAMILY PP2C-like 71 338 IPR036457 -
Bpe02g01233 374 ProSiteProfiles PPM-type phosphatase domain profile. 79 335 IPR001932 -
Bpe02g01233 374 PANTHER PROTEIN PHOSPHATASE 2C 66 357 IPR015655 GO:0004722|GO:0006470
Bpe02g01233 374 Pfam Protein phosphatase 2C 82 327 IPR001932 -
Bpe02g01233 374 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 66 357 - -
Bpe02g01233 374 CDD PP2Cc 78 335 IPR001932 -
Bpe02g01233 374 SMART PP2C_4 69 333 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00303 Bpe-Chr2:1997928 Bpe02g01233 Bpe-Chr2:15945062 5.55E-108 dispersed
Bpe02g01233 Bpe-Chr2:15945062 Bpe04g00287 Bpe-Chr4:1838362 7.86E-107 dispersed
Bpe02g01233 Bpe-Chr2:15945062 Bpe01g00628 Bpe-Chr1:4185663 9.32E-115 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01233 K14803 - jre:108982376 555.829