Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01247 GGATCAAAAATATATGCAACAGTAGATTTAGACAAAACAAGAGTCGGCCGCACCAGAGTGATCAAAAATCAACCTTCAAGCCCTCGATGGAACGAGTCGTTCCACATATACTGTGTGCATTACATCTCGTATGTTATATTTACAGTAAAGGAGGATGATCCAATCGGAGCAACACTGATTGGTAGAGCTTATGTACCTGTAGAGGATATTATAAAAGGATATGTAGTAGACAGATGGGTAGAGATTTTGGACGAAGAGCAAAATCCAATTCATGGTGGATCTAAAATTCATGTGAAGCTTCAATTTTTTGACATAAAAGAAGACAGTAATTGGTCTCAGGGAATAAAAACACCCCTATTTGGGGGAGTTCCTTACTCTTTCTTCAATCAAAGATCTGGCTGCAGAGTTTCTCTTTACCAAGATGCACATGTCTCTGATGATTTCATCGATCACCTCGGAAGGTCTGGCGGACACTATCCGGAGCTTCGTAGGTGCTGGGAGGACATCTTCGATGCGCTAATGAACGCAAAACACTTGATTTACATAACTGGATGGTCTGTGTACACTAAAATCACATTGGTAAGAGATCCAAGAAGACCAAAACCAGGAGGTGATATGACTCTTGGGGAGCTGCTGATAAAGAAGGCCAATGAAGGCGTGACTGTCTTGATGCTTGTTTGGGATGATAGAACCTCCATTCCTGAGTTTAAAAAAGTCGGTAAAATGGAGACACATGATCAAGAAACTGAAGAGTTCTTTCGAAACACAAAAGTCCACTGTTTTCTATGCCCTCGAAATCCTGATGATGGTTTGAGCATAGTTCAGGGATTTGCAATTGCTACAATGTTCACTCATCATCAGAAAACAGTTGTGGTCGATGCAGAGGTATCCGGTGAAGAATTTGGAAAAAGGAGAATTGTGAGCTTTGTCGGGGGAATTGATCTGTGTGACGGTAGATACGATTCGCAAGAGCATCATTTATTTTCAACCTTAAGCTCCACCCACCGGGATGATTTTCATCAACCCAACTTTTCAGGCTCCTCAATTCAGAAAGGTGGTCCTAGGGAGCCCTGGCACGACATCCATTGCCGCCTGGAAGGGTCTGTGGCTTGGGATGTTCTTTACAATTTTGAGCAACGGTGGCTGAAGCAAATTGGAAATAAGTTATTGATTCCATTATGGAAACTTGATGAAATTATAGTTCGTCCATCGCCCATTTTATTGGCTGATGATCCTGAAGTGTGGAATGTTCAGATATTTCGATCCATTGATGGTGGTGCAGCATTTGGCTTCCCTGAAAATCCGGAAGAAGCAGCTTCAGTTGGCCTTGTGAGTGGAAAAGACAACATCATTGACCGAAGCATTCAAGATGCTTATATCAATGCTATTCGTCGAGCCAAAAACTTTGTCTACATAGAAAACCAATATTTTCTCGGAAGCTCATTTGGATGGAAATCCAGTGATATCAAGGTTGAAGACATAGGAGCTCTGCATCTTATACCAAAGGAGCTTTCCCTCAAAGTTGTCAGTAAAATTGAAGCAGGAGAGAGATTTGCTGTCTATGTTGTGATCCCGATGTGGCCTGAAGGCATCCCAGAGAGCGGCCCTGTCCAAGCAATGTTAGATTGGCAAAGGAGAACGATGGAGATGATGTATGCCGACATCAGCGAAGCTCTTAGAAGGAAAGGTTTGGATTCAAACCCAAGAGAATTCTTGACATTCTTCTGTCTTGGAAATAGGGAATTAATAAACCCGGGAGAATATGTCCCAACCGAAAAGCCTGAGCCCGACTCCGACTACATTAGAGCTCAAGAGGCTAGACGATTCATGATTTACGTCCATGCAAAAATGATGATAGTTGACGACGAGTACATAATAATCGGATCAGCCAACATCAACGAAAGATCGATGGAAGGAGGACGAGACTCGGAGATATGCATGGGGGCGTTTCAGCCGCATCACTTGGGGAGCAAGCAGGGAGCAAGAGGTCAGATATTCAAGTTCAGAATGTCGCTGTGGATGGAGCATCTGGGACTAACCCACAGCTCGATTCAACACCCGGAAAGCCTTAGCTGTGTTAATTTAGTGAACGCCCTTGCTCAAGAGAGTTGGGAGGTTTACTCGAGCAACACGTCTGCGAAGAATCTCCCATGTCACCTCCTTCGATTCCCCATTGAAGTAGGCAATGATGGGTCTCTTTCCACTTTGCCAGGGGTTGAATTTTTTCCCGACACTAAGGCTCCTGTTCTTGGTACAATGTCACCCTATCTTCCTCCCATCTTGACCACTTGA 2292 43.8 GSKIYATVDLDKTRVGRTRVIKNQPSSPRWNESFHIYCVHYISYVIFTVKEDDPIGATLIGRAYVPVEDIIKGYVVDRWVEILDEEQNPIHGGSKIHVKLQFFDIKEDSNWSQGIKTPLFGGVPYSFFNQRSGCRVSLYQDAHVSDDFIDHLGRSGGHYPELRRCWEDIFDALMNAKHLIYITGWSVYTKITLVRDPRRPKPGGDMTLGELLIKKANEGVTVLMLVWDDRTSIPEFKKVGKMETHDQETEEFFRNTKVHCFLCPRNPDDGLSIVQGFAIATMFTHHQKTVVVDAEVSGEEFGKRRIVSFVGGIDLCDGRYDSQEHHLFSTLSSTHRDDFHQPNFSGSSIQKGGPREPWHDIHCRLEGSVAWDVLYNFEQRWLKQIGNKLLIPLWKLDEIIVRPSPILLADDPEVWNVQIFRSIDGGAAFGFPENPEEAASVGLVSGKDNIIDRSIQDAYINAIRRAKNFVYIENQYFLGSSFGWKSSDIKVEDIGALHLIPKELSLKVVSKIEAGERFAVYVVIPMWPEGIPESGPVQAMLDWQRRTMEMMYADISEALRRKGLDSNPREFLTFFCLGNRELINPGEYVPTEKPEPDSDYIRAQEARRFMIYVHAKMMIVDDEYIIIGSANINERSMEGGRDSEICMGAFQPHHLGSKQGARGQIFKFRMSLWMEHLGLTHSSIQHPESLSCVNLVNALAQESWEVYSSNTSAKNLPCHLLRFPIEVGNDGSLSTLPGVEFFPDTKAPVLGTMSPYLPPILTT 763
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16001717 16004108 + Bpe009103.1 Bpe02g01247 99396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01247 763 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 104 IPR035892 -
Bpe02g01247 763 PIRSF PLD_plant 1 763 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bpe02g01247 763 Gene3D C2 domain 1 116 IPR035892 -
Bpe02g01247 763 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 281 319 IPR001736 GO:0003824
Bpe02g01247 763 Pfam C2 domain 2 81 IPR000008 -
Bpe02g01247 763 Gene3D Endonuclease Chain A 427 649 - -
Bpe02g01247 763 CDD C2_plant_PLD 1 103 - -
Bpe02g01247 763 Gene3D Endonuclease Chain A 153 394 - -
Bpe02g01247 763 SUPERFAMILY Phospholipase D/nuclease 107 399 - -
Bpe02g01247 763 Pfam Phospholipase D C terminal 683 752 IPR024632 -
Bpe02g01247 763 SMART pld_4 281 319 IPR001736 GO:0003824
Bpe02g01247 763 SMART pld_4 609 636 IPR001736 GO:0003824
Bpe02g01247 763 SMART C2_3c 3 79 IPR000008 -
Bpe02g01247 763 SUPERFAMILY Phospholipase D/nuclease 443 692 - -
Bpe02g01247 763 PANTHER PHOSPHOLIPASE D 1 763 IPR015679 -
Bpe02g01247 763 Pfam Phospholipase D Active site motif 281 319 IPR001736 GO:0003824
Bpe02g01247 763 Pfam Phospholipase D Active site motif 610 636 IPR001736 GO:0003824
Bpe02g01247 763 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 609 636 IPR001736 GO:0003824
Bpe02g01247 763 PANTHER PHOSPHOLIPASE D ALPHA 3 1 763 - -
Bpe02g01247 763 ProSiteProfiles C2 domain profile. 1 80 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01247 Bpe-Chr2:16001717 Bpe08g00570 Bpe-Chr8:3995518 0 dispersed
Bpe10g00609 Bpe-Chr10:12949089 Bpe02g01247 Bpe-Chr2:16001717 0 wgd
Bpe02g01247 Bpe-Chr2:16001717 Bpe06g00699 Bpe-Chr6:17567797 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01247 K01115 - pop:7468635 1165.6