Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01256 | ATGTCTCTCCACAACATCACCTACAAAACCCCCCCTCTCTCCCTCCCTCCTACCATTCAATTTCTCGCTCTCCCCAACGCTATGGACACACCGCAGAGGCGATACCGAGGCGTCAGGCAGAGGCATTGGGGCTCCTGGGTCTCCGAAATTCGCCATCCAATACTGAAGATTAGGATTTGGGTGGGGACGTTTCAAACGGCAGAAGATGCAGCCAGAGCCTACGACGAAGCAGCGAGGTTCATGTGCGGACCCAGGGCTCGAACCAACCTCCCTTACGACCCAAATGCTTCTTCCAAGCTTCTTGGTGCAACTTTGACAGCCAAGCTTCACCGCTGCTACATGGCTTCCCTGCAACTCAATAACCAGAAGATGCAGCCACTAGAAAAAGTCAAATCCACGAAACACAACCCCAGGGCTGCAGTGCCGGAGGGGAATGGGAAGGGGAAGAAATTGAAATTGGAACAGAGCGTTGAAGAGGAGGAGATAGAGCAAATGATAGAGGAGCTTCTAGATTATGGGTCTATGGAGCTTTGCATGTAA | 540 | 52.04 | MSLHNITYKTPPLSLPPTIQFLALPNAMDTPQRRYRGVRQRHWGSWVSEIRHPILKIRIWVGTFQTAEDAARAYDEAARFMCGPRARTNLPYDPNASSKLLGATLTAKLHRCYMASLQLNNQKMQPLEKVKSTKHNPRAAVPEGNGKGKKLKLEQSVEEEEIEQMIEELLDYGSMELCM | 179 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 16047004 | 16047634 | + | Bpe009112.1 | Bpe02g01256 | 99405 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01256 | 179 | PRINTS | Ethylene responsive element binding protein signature | 57 | 73 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g01256 | 179 | PRINTS | Ethylene responsive element binding protein signature | 35 | 46 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g01256 | 179 | SUPERFAMILY | DNA-binding domain | 34 | 92 | IPR016177 | GO:0003677 | |
Bpe02g01256 | 179 | MobiDBLite | consensus disorder prediction | 129 | 152 | - | - | |
Bpe02g01256 | 179 | Pfam | AP2 domain | 34 | 83 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g01256 | 179 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003-LIKE | 148 | 178 | - | - | |
Bpe02g01256 | 179 | CDD | AP2 | 34 | 93 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g01256 | 179 | SMART | rav1_2 | 34 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g01256 | 179 | Gene3D | AP2/ERF domain | 33 | 92 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe02g01256 | 179 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003-LIKE | 28 | 136 | - | - | |
Bpe02g01256 | 179 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 148 | 178 | - | - | |
Bpe02g01256 | 179 | ProSiteProfiles | AP2/ERF domain profile. | 34 | 91 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g01256 | 179 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 28 | 136 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01256 | Bpe-Chr2:16047004 | Bpe02g02027 | Bpe-Chr2:21876454 | 6.47E-31 | dispersed | |
Bpe02g01256 | Bpe-Chr2:16047004 | Bpe06g00683 | Bpe-Chr6:17434406 | 1.87E-52 | wgd | |
Bpe02g01256 | Bpe-Chr2:16047004 | Bpe09g00436 | Bpe-Chr9:11173869 | 3.16E-50 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20957 | PF00847 | AP2 | 1.80E-11 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01256 | - | - | twl:119993180 | 186.422 |