Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01265 ATGGGTGTCTACCTAAGCACTCCCAAGACCGAGAAGTTCTCGGAAGATGGTGAGAATGGAAGGCTGAGATACGGTTTGTCATCCATGCAAGGGTGGCGTGCCACAATGGAGGATGCTCATGCTGCATATCCTGATCTTGATGCCTCCACGTCATTCTTTGGTGTTTATGATGGTCATGGAGGTAAAGTAGTTGCCAAATTTTGTGCGAAGCATCTACACCAGCAACTTTTGAAGAATGAAGCATATGCTGCAGGAGATACAAGAACTGCTTTACAACAAGCGTTTCTCAGAATGGACGAAATGATGCGTGGGCAAAGGGGTTGGAGAGAGTTGGCTATTCTTGGAGATAAAATAAACAAGCTTACTGGGATGATAGAAGGGTTAATCTGGTCACCACGAAGCAACGATGGTCGTAACCAAGTCAATGATTGGGCTTTTGAAGAGGGCCCTCACTCTGATTTTACTGGTCCAACTTCTGGGTGCACGGCTTGTGTTTCAGTTATTAGAAACAACCAACTTCTTGTTGCAAATGCCGGAGACTCTCGTTGTGTGCTATCGAGGGCAGGCAAGGCTCAGAATATGTCTAAAGATCACAAACCTGATCTAGAGGTTGAGAAGGAAAGGATTTTAGAAGCTGGTGGATTTATACATGCTGGAAGAGTCAATGGTTGCTTGAATCTCGCCAGAGCAATTGGTGACGTGGAATTCAAGCAAAATAAATTTTTGCCTGCCCAAATGCAAATCGTGACTGCCCATCCTGATGTTACCATGGCTGAGCTCAACAATGACGATGATTTTCTTGTGCTGGCATGTGATGGCATCTGGGATTGTATGTCTAGCCAACAACTTGTGGAGTTTATACAAGAACAACTAAGAACGGAAACCAAGCTGTCTTTGGTGTGTGAAAGAGTACTGGACCAATGTTTAGCACCAACGGCGGGTGGAGACGGATGTGATAACATGACCATGATCTTAGTGCAGTTGAAGAAACAACCCATCACAAGTGGAGATGAACCATCTTCTCCCTCAACGTGA 1035 45.12 MGVYLSTPKTEKFSEDGENGRLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGKVVAKFCAKHLHQQLLKNEAYAAGDTRTALQQAFLRMDEMMRGQRGWRELAILGDKINKLTGMIEGLIWSPRSNDGRNQVNDWAFEEGPHSDFTGPTSGCTACVSVIRNNQLLVANAGDSRCVLSRAGKAQNMSKDHKPDLEVEKERILEAGGFIHAGRVNGCLNLARAIGDVEFKQNKFLPAQMQIVTAHPDVTMAELNNDDDFLVLACDGIWDCMSSQQLVEFIQEQLRTETKLSLVCERVLDQCLAPTAGGDGCDNMTMILVQLKKQPITSGDEPSSPST 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16086942 16090674 - Bpe009121.1 Bpe02g01265 99414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01265 344 Pfam Protein phosphatase 2C 157 313 IPR001932 -
Bpe02g01265 344 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Bpe02g01265 344 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Bpe02g01265 344 SMART PP2C_SIG_2 28 328 IPR001932 -
Bpe02g01265 344 SUPERFAMILY PP2C-like 3 329 IPR036457 -
Bpe02g01265 344 SMART PP2C_4 13 326 IPR001932 -
Bpe02g01265 344 Gene3D - 1 329 IPR036457 -
Bpe02g01265 344 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Bpe02g01265 344 CDD PP2Cc 23 328 IPR001932 -
Bpe02g01265 344 PANTHER PROTEIN PHOSPHATASE 2C 1 336 IPR015655 GO:0004722|GO:0006470
Bpe02g01265 344 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 336 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01265 Bpe04g00089 CCT
Bpe02g01265 Bpe04g00089 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01265 Bpe-Chr2:16086942 Bpe02g00303 Bpe-Chr2:1997928 9.57E-39 dispersed
Bpe02g00524 Bpe-Chr2:3410677 Bpe02g01265 Bpe-Chr2:16086942 7.48E-35 wgd
Bpe02g01265 Bpe-Chr2:16086942 Bpe04g00089 Bpe-Chr4:656553 0 wgd
Bpe02g01265 Bpe-Chr2:16086942 Bpe06g00669 Bpe-Chr6:17370604 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01265 K17499 - jre:109001007 586.645