Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01269 | ATGGCAGACGTGGCGCTGACGGGGGAGATTGAAGCCACCGCCGCTCGGCTCGGAATCGATCTCTCCCAAATCGATCTTGACTCCATTCGCCTCCCTCCTGGTGAAGACTTCGGCATCATTAGTGATGATGAGGATGTTTTGCAAGAGGAGAATCTGGAGTTCGATACTGGATTTGGAAACATTATTGTTGTGGATAATCTTCCTGTTGTTCCCCGTGAAAAATTTGAGAAGCTTGAAGGGGTAATTCGCAAGATATACAGTCAAATTGGAATAATCAAGGAGGATGGTCTTTGGATGCCAGTTGATCCTGAGACACAAAAAACTTTAGGTTACTGCTTCATCGAGTACAATACCCCCCAGGAAGCTGAACTTGCCAAGGAGAAAACAAATGGATACAAACTCGACAGAGCACACATATTTGCTGTTAGCATGTTTGAAGATTTCGATAAATTCATGAAGGTTCCTGATGAGTGGGTTACTCCTGAAAGCATTTCATACTCTCCGGGGGAGAATCTTCAAAGTTGGTTGACAGATGAGAAAGCTCGTGATCAGTTTGTGATTCGTGCTGGTAATGATACTGAAGTTTTATGGAATGATGCTAGACATATGAAGCCAGACCCTGTGTACAAGCGTACATTTTGGACTGAAGGTTTTGTCCAATGGTCATCTTTTGGGACTTACTTGGCAACAGTTCACCGCCAAGGTGCTGCTGTTTGGGGTGGTGCCAGCACATTTAATCGCTTAATGCGTTATGCTCATTCTCTGGTTAAACTGATTGACTTTTCACCTGGTGAGAAATATTTAGTAACTTACAGTTGTCATGAACCAAGCAATCCTAGAGATGCTAATAGGATTGTGATCAACATATTTGATGTTAGAACTGGTAAAGTAATGCGGGATTTCAAGGGAAGTCCTGATGAATTTGCTGTTGGAGGAACAGGAGCTGTCACAGGAGTTTCTTGGCCAGTTTTCAGATGGGGTGGAAAGAATGATAAATATTTTGCCAGGATTGGAAAAAATATAATCTCCGTCTATGAAACAGAAACTTTTTCACTGGTTGACAAGAAGTCTTTGAAGGTTGACAATGTCGTGGATTTTAGTTGGTCTCCAACTGATCCAATTCTTGCACTTTTTGTTCCCGAGCTAGGTGGCGGCAACCAACCTGCTAGGGTTAGCCTTGTCCAAATTCCTAGCAAAGAAGAAATTAGGCAGAAAAATCTTTTCAGTGTTAGTGATTGCAAAATGTATTGGCAAAGCAATGGAGATTATCTTGCTGTGAAGGTTGATCGTTATACAAAGACCAAAAAGAGCACATACACTGGATTTGAGCTTTTCCGCATCAAAGAACGTGACATTCCAATTGAGGTTTTAGAACTTGAAAACAAGAATGATAAAATTATTGCTTTTGCTTGGGAGCCCAAGGGCCACAGATTTGCTGTTATTCATGGTGATAACCCCAGGCCAGACATAAGTTTTTACTCAATGCGAACTGCTCACAATACTGGTCGAGTTTCGAAGCTCACCACTCTCAAAGGGAAACAAGCAAATGCTCTTTTCTGGTCACCAGCTGGGCGTTTTATTATTCTTGCTGGACTAAAGGGTTTCAACGGACAGCTTGAGTTTTATAATGTTGATGAGCTTGAAACCATGGCTACAGCTGAGCATTTCATGGCGACAGACATTGAATGGGATCCCACTGGAAGGTGGTATGTTGCAACTTCTGTGACATCTGTTCATGAGATGGAAAATGGTTTCAACATATGGTCTTTTAATGGAAAACTACTGTATAGAATATTGAAGGATCATTTCTATCAGTTCTCGTGGCGGCCAAGGCCACCATCGGTGTTATCACCTGAGAAAGAGGAGGAGATAGCTAAGAACTTGAAGAAGTACAGTAAGAAGTACGAAGCAGAAGACCAAGACGTGTCAATGCTATTAAGTGAGCAGGATCGGGAGAAACGGAAGAAGTTGAAGGATGAATGGGATAAATGGGTGGCCGAGTGGAGAAGGTTGCATGAAGAAGAAAAACTGTGGAGGCAGAAACTGAGGGATGGTGAAGCGAGTGATGAAGAAGAAGAATACGAAGCCAAAGAGGTTGAAGTTGAGGAGATTCTTGATGTTGTGGAGGAGGTTGTCGATCTTGAAGAGTAA | 2151 | 42.49 | MADVALTGEIEATAARLGIDLSQIDLDSIRLPPGEDFGIISDDEDVLQEENLEFDTGFGNIIVVDNLPVVPREKFEKLEGVIRKIYSQIGIIKEDGLWMPVDPETQKTLGYCFIEYNTPQEAELAKEKTNGYKLDRAHIFAVSMFEDFDKFMKVPDEWVTPESISYSPGENLQSWLTDEKARDQFVIRAGNDTEVLWNDARHMKPDPVYKRTFWTEGFVQWSSFGTYLATVHRQGAAVWGGASTFNRLMRYAHSLVKLIDFSPGEKYLVTYSCHEPSNPRDANRIVINIFDVRTGKVMRDFKGSPDEFAVGGTGAVTGVSWPVFRWGGKNDKYFARIGKNIISVYETETFSLVDKKSLKVDNVVDFSWSPTDPILALFVPELGGGNQPARVSLVQIPSKEEIRQKNLFSVSDCKMYWQSNGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHGDNPRPDISFYSMRTAHNTGRVSKLTTLKGKQANALFWSPAGRFIILAGLKGFNGQLEFYNVDELETMATAEHFMATDIEWDPTGRWYVATSVTSVHEMENGFNIWSFNGKLLYRILKDHFYQFSWRPRPPSVLSPEKEEEIAKNLKKYSKKYEAEDQDVSMLLSEQDREKRKKLKDEWDKWVAEWRRLHEEEKLWRQKLRDGEASDEEEEYEAKEVEVEEILDVVEEVVDLEE | 716 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 16115050 | 16119101 | + | Bpe009125.1 | Bpe02g01269 | 99418 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01269 | 716 | Gene3D | - | 59 | 143 | IPR012677 | - | |
Bpe02g01269 | 716 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED | 8 | 713 | IPR011400 | GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Bpe02g01269 | 716 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 82 | 136 | IPR000504 | GO:0003723 | |
Bpe02g01269 | 716 | PIRSF | Transl_init_eIF3b | 6 | 714 | IPR011400 | GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Bpe02g01269 | 716 | Gene3D | - | 453 | 622 | IPR011042 | - | |
Bpe02g01269 | 716 | Gene3D | - | 163 | 426 | IPR015943 | GO:0005515 | |
Bpe02g01269 | 716 | PANTHER | BNACNNG51870D PROTEIN | 8 | 713 | - | - | |
Bpe02g01269 | 716 | SUPERFAMILY | RNA-binding domain, RBD | 59 | 139 | IPR035979 | GO:0003676 | |
Bpe02g01269 | 716 | Pfam | Eukaryotic translation initiation factor eIF2A | 405 | 606 | IPR013979 | - | |
Bpe02g01269 | 716 | CDD | RRM_eIF3B | 59 | 142 | IPR034363 | - | |
Bpe02g01269 | 716 | Coils | Coil | 687 | 707 | - | - | |
Bpe02g01269 | 716 | Hamap | Eukaryotic translation initiation factor 3 subunit B [EIF3B]. | 48 | 713 | IPR011400 | GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Bpe02g01269 | 716 | SMART | rrm1_1 | 61 | 142 | IPR000504 | GO:0003723 | |
Bpe02g01269 | 716 | SUPERFAMILY | DPP6 N-terminal domain-like | 219 | 599 | - | - | |
Bpe02g01269 | 716 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 60 | 147 | IPR000504 | GO:0003723 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01269 | Bpe-Chr2:16115050 | Bpe02g01672 | Bpe-Chr2:19368045 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01269 | K03253 | - | csv:101213144 | 1276.92 |