Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01298 ATGGCGTTCTCGGAAAACTCCTCCCGTCACTCTCTCATCCCCAGCTTCCTCTACTCTACCTCTTCCCCTACCAAATCCATAGCCGTCGAGAAGATGCTCCGGAATAGCCCTAGCGGCCTCTCTTCCCCTGCTCCTGCTGCCGATGCTATTCCGTCGTCGAAGAGGCGCTTTGTGATTCCGTCTCCAAGCGAGCAGAGCAAGAAGATCGAGATGTACTCCCCGGCCTTCTACGCTGCGTGTACTGCTGGTGGAATCCTTAGCTGCGGTCTTACGCATATGGCCGTCACTCCTCTTGACCTTGTCAAATGTAATATGCAGATCGACCCAGCAAAATACAAAAGCATTTCATCTGGATTTGGGGTCTTGCTCAAGGAGCAGGGAGTTAGGGGCTTCTTTAGGGGTTGGGTGCCTACCCTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATTCTATGAATTTTTTAAGAAATACTACTCAGATATAGCTGGACCAGAATATGCCGCTAAGTATAAGACCTTGATTTATCTAGCTGGATCAGCATCTGCAGAGGTGATTGCAGATATTGCCCTTTGTCCCTTTGAAGCCGTGAAAGTCCGGGTTCAAACTCAACCTGGTTTTGCCAGAGGTCTGTCGGATGGCCTTCCTAAATTTGTCAGATCTGAAGGCACTCTTGGGTTGTATAAGGGCCTTGTTCCTCTCTGGGGACGTCAGATTCCATATACAATGATGAAGTTTGCATCCTTCGAAACTATTGTGGAGTTGATCTATAAGCATGCTATTCCAACGCCCAAGGACCAGTGCAGCAAAAATCTACAGCTTGGTGTTAGTTTTGCTGGTGGCTACGTAGCTGGTGTTTTTTGTGCAATTGTTTCTCACCCTGCTGATAACCTTGTTTCTTTTCTCAACAATGCCCAAGGGGCAACTGTCGGTGATGCTGTGAAGAAACTTGGTTTATGGGGTCTCTTTACCCGTGGGCTTCCCCTCCGTATTGTCATGATTGGAACACTCACTGGAGCTCAGTGGGGTATTTACGATGCATTCAAAGTTTTTGTTGGACTGCCAACTACCGGTGGTGTAACTCCTGTTCCAGCTGCTGCTGCTTCAGAACTTGCGAAAGTTTAG 1128 48.49 MAFSENSSRHSLIPSFLYSTSSPTKSIAVEKMLRNSPSGLSSPAPAADAIPSSKRRFVIPSPSEQSKKIEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGTLGLYKGLVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKDQCSKNLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAQGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVTPVPAAAASELAKV 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16500947 16503401 + Bpe009154.1 Bpe02g01298 99447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01298 375 Pfam Mitochondrial carrier protein 78 161 IPR018108 -
Bpe02g01298 375 Pfam Mitochondrial carrier protein 176 260 IPR018108 -
Bpe02g01298 375 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 369 IPR044677 GO:0005315|GO:1990547
Bpe02g01298 375 SUPERFAMILY Mitochondrial carrier 78 348 IPR023395 -
Bpe02g01298 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 256 IPR018108 -
Bpe02g01298 375 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 4 369 - -
Bpe02g01298 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
Bpe02g01298 375 Gene3D Mitochondrial carrier domain 75 353 IPR023395 -
Bpe02g01298 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 352 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01298 Bpe-Chr2:16500947 Bpe08g01410 Bpe-Chr8:14948104 2.68E-07 dispersed
Bpe12g00155 Bpe-Chr12:1135908 Bpe02g01298 Bpe-Chr2:16500947 8.86E-103 transposed
Bpe13g00186 Bpe-Chr13:9797064 Bpe02g01298 Bpe-Chr2:16500947 0 transposed
Bpe14g01360 Bpe-Chr14:10959499 Bpe02g01298 Bpe-Chr2:16500947 0 wgd
Bpe14g01360 Bpe-Chr14:10959499 Bpe02g01298 Bpe-Chr2:16500947 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01298 K15102 - csv:101221771 637.106