Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01300 | ATGGAGCGGGAGCTTCAAAGTCCGGAGCTGGGTAAAGCCGCCACTTTAGAAGGGAGCAGCAGAGTTAGCCGTGGGTCGGATCGTTTCGGGTTGGCCCGAGATCTTGTCACCGACTGTGGCGTCCACAGGAAGAAGAGGATGGCCAGGCAGAGACGATCCTCCATTCTCAACTTCCATCTCTCCTTCTCTTCCTCCAGCCCTCACGTGCCAACCTCTTCAGTAATTGATCCGAGGCAGCTCAGATTCCTTTTTCAGAAGGAGCTGAAAAACAGTGATGTCAGCTCTCTCAAGAGAATGATTCTCCCAAAGAAAGCAGCTGAGACTCATCTTCCTGTCCTTGAATCGAAGGAAGGCATTCTTATTAACATGGATGACTTGGATGGTCTACACGCTTGGAGCTTCAAGTATAGCAGGTTTTGGCCAAACAACAACAGCCGAATGTATGTGCTCGAAAACACTGGGGACTTTGTTAACGCCCATGATTTACAGCTAGGAGACCTCATCTTAGTCTACCAAGATGTTCAAAATCAAAATTATGTAATTCAAGCGAAAAAGACTTCGGATGAAGAAATATACAGCGACATAACGGGAAGCAACACAAACATCAATCTGAATGACGAGTTACTTTTTAACGATAACTTGGAGTTTATGAACAGGCCTTCCAACGCTTTCTTCTCCGTGAATTGGCCATCCCTTGACGATGATCAAGGCATGTCCTTCGTGTATGACACAACGAGCTTCTCAAATGACTATCTGTTGGACTTTCTGGGTGGGCCTATGACCAGCTACTCCAGACCAGTGGCGACTCCGGAAGGTTTTGGGTCGGTTGAAAACTTGTCTCTTGATGATTTCTATGGCTTTTAA | 864 | 46.64 | MERELQSPELGKAATLEGSSRVSRGSDRFGLARDLVTDCGVHRKKRMARQRRSSILNFHLSFSSSSPHVPTSSVIDPRQLRFLFQKELKNSDVSSLKRMILPKKAAETHLPVLESKEGILINMDDLDGLHAWSFKYSRFWPNNNSRMYVLENTGDFVNAHDLQLGDLILVYQDVQNQNYVIQAKKTSDEEIYSDITGSNTNINLNDELLFNDNLEFMNRPSNAFFSVNWPSLDDDQGMSFVYDTTSFSNDYLLDFLGGPMTSYSRPVATPEGFGSVENLSLDDFYGF | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 16518949 | 16521187 | + | Bpe009156.1 | Bpe02g01300 | 99449 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01300 | 287 | Gene3D | - | 80 | 198 | IPR015300 | - | |
Bpe02g01300 | 287 | CDD | B3_DNA | 82 | 185 | IPR003340 | GO:0003677 | |
Bpe02g01300 | 287 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Bpe02g01300 | 287 | ProSiteProfiles | B3 DNA-binding domain profile. | 84 | 187 | IPR003340 | GO:0003677 | |
Bpe02g01300 | 287 | SUPERFAMILY | DNA-binding pseudobarrel domain | 82 | 181 | IPR015300 | - | |
Bpe02g01300 | 287 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 | 42 | 285 | - | - | |
Bpe02g01300 | 287 | Pfam | B3 DNA binding domain | 84 | 182 | IPR003340 | GO:0003677 | |
Bpe02g01300 | 287 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 42 | 285 | IPR044800 | GO:0003700 | |
Bpe02g01300 | 287 | SMART | B3_2 | 84 | 187 | IPR003340 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01300 | Bpe-Chr2:16518949 | Bpe03g00937 | Bpe-Chr3:29034603 | 7.65E-34 | dispersed | |
Bpe02g01300 | Bpe-Chr2:16518949 | Bpe11g01690 | Bpe-Chr11:13188925 | 2.58E-12 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20961 | PF02362 | B3 | 3.50E-15 | CL0405 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01300 | - | - | tcc:18601105 | 308.531 |