Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01300 ATGGAGCGGGAGCTTCAAAGTCCGGAGCTGGGTAAAGCCGCCACTTTAGAAGGGAGCAGCAGAGTTAGCCGTGGGTCGGATCGTTTCGGGTTGGCCCGAGATCTTGTCACCGACTGTGGCGTCCACAGGAAGAAGAGGATGGCCAGGCAGAGACGATCCTCCATTCTCAACTTCCATCTCTCCTTCTCTTCCTCCAGCCCTCACGTGCCAACCTCTTCAGTAATTGATCCGAGGCAGCTCAGATTCCTTTTTCAGAAGGAGCTGAAAAACAGTGATGTCAGCTCTCTCAAGAGAATGATTCTCCCAAAGAAAGCAGCTGAGACTCATCTTCCTGTCCTTGAATCGAAGGAAGGCATTCTTATTAACATGGATGACTTGGATGGTCTACACGCTTGGAGCTTCAAGTATAGCAGGTTTTGGCCAAACAACAACAGCCGAATGTATGTGCTCGAAAACACTGGGGACTTTGTTAACGCCCATGATTTACAGCTAGGAGACCTCATCTTAGTCTACCAAGATGTTCAAAATCAAAATTATGTAATTCAAGCGAAAAAGACTTCGGATGAAGAAATATACAGCGACATAACGGGAAGCAACACAAACATCAATCTGAATGACGAGTTACTTTTTAACGATAACTTGGAGTTTATGAACAGGCCTTCCAACGCTTTCTTCTCCGTGAATTGGCCATCCCTTGACGATGATCAAGGCATGTCCTTCGTGTATGACACAACGAGCTTCTCAAATGACTATCTGTTGGACTTTCTGGGTGGGCCTATGACCAGCTACTCCAGACCAGTGGCGACTCCGGAAGGTTTTGGGTCGGTTGAAAACTTGTCTCTTGATGATTTCTATGGCTTTTAA 864 46.64 MERELQSPELGKAATLEGSSRVSRGSDRFGLARDLVTDCGVHRKKRMARQRRSSILNFHLSFSSSSPHVPTSSVIDPRQLRFLFQKELKNSDVSSLKRMILPKKAAETHLPVLESKEGILINMDDLDGLHAWSFKYSRFWPNNNSRMYVLENTGDFVNAHDLQLGDLILVYQDVQNQNYVIQAKKTSDEEIYSDITGSNTNINLNDELLFNDNLEFMNRPSNAFFSVNWPSLDDDQGMSFVYDTTSFSNDYLLDFLGGPMTSYSRPVATPEGFGSVENLSLDDFYGF 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16518949 16521187 + Bpe009156.1 Bpe02g01300 99449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01300 287 Gene3D - 80 198 IPR015300 -
Bpe02g01300 287 CDD B3_DNA 82 185 IPR003340 GO:0003677
Bpe02g01300 287 MobiDBLite consensus disorder prediction 1 25 - -
Bpe02g01300 287 ProSiteProfiles B3 DNA-binding domain profile. 84 187 IPR003340 GO:0003677
Bpe02g01300 287 SUPERFAMILY DNA-binding pseudobarrel domain 82 181 IPR015300 -
Bpe02g01300 287 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 42 285 - -
Bpe02g01300 287 Pfam B3 DNA binding domain 84 182 IPR003340 GO:0003677
Bpe02g01300 287 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 42 285 IPR044800 GO:0003700
Bpe02g01300 287 SMART B3_2 84 187 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01300 Bpe-Chr2:16518949 Bpe03g00937 Bpe-Chr3:29034603 7.65E-34 dispersed
Bpe02g01300 Bpe-Chr2:16518949 Bpe11g01690 Bpe-Chr11:13188925 2.58E-12 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20961 PF02362 B3 3.50E-15 CL0405 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01300 - - tcc:18601105 308.531