Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bpe02g01307	ATGGGAACCTATCAACTGTTCTTCCCTTGCTCTTCCTCCACCACACTCTCAGTTTATGATCATGGTTCCCCAATCCTCGGAAGCTCCAACGATGGCTTTCATTGCGAGAGTTCAAATGATTCTTTCCTGGGGATGAAGACGATGTCGGAGTTTCTGGATATCCCGAGGGCTGTACCAAAGAAAATGTTTCAGAGCGGAAGCAAATTTGGTCCAGAGAAGAGGGATAAGAAGATCAGAAAACCTAGATTATCCTTCCAAACTCGGAGTCCTGTTGATATACTTGACGATGGCTATCGGTGGAGGAAATACGGTCAGAAAGCAGTCAAGAACAACAAATTTCCCAGGAGCTATTACCGGTGCACACACGAGGGGTGCAAAGTGAAGAAGCAAGTTCAAAGAGTAACAGGAGATGAGGGGCTTGTGGTGACGACCTATGAAAGCATTCACACACATCCCCTCAACAAACCCACTGATAACTTCGAGCATATCCTGAATCAGATGCAAATCTACCCTCCACTTTTCCCTTGA	528	46.02	MGTYQLFFPCSSSTTLSVYDHGSPILGSSNDGFHCESSNDSFLGMKTMSEFLDIPRAVPKKMFQSGSKFGPEKRDKKIRKPRLSFQTRSPVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHEGCKVKKQVQRVTGDEGLVVTTYESIHTHPLNKPTDNFEHILNQMQIYPPLFP	175

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
2	16567527	16568156	+	Bpe009162.3	Bpe02g01307	99456

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bpe02g01307	175	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	2	170	IPR044810	GO:0003700
	Bpe02g01307	175	Pfam	WRKY DNA -binding domain	95	152	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bpe02g01307	175	Gene3D	WRKY domain	79	154	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bpe02g01307	175	PANTHER	WRKY TRANSCRIPTION FACTOR 75-RELATED	2	170	-	-
	Bpe02g01307	175	SMART	WRKY_cls	94	153	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bpe02g01307	175	SUPERFAMILY	WRKY DNA-binding domain	86	153	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bpe02g01307	175	ProSiteProfiles	WRKY domain profile.	89	154	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Bpe02g01307	Bpe11g01486	CCT
	Bpe02g01307	Bpe11g01486	ECH

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Bpe02g01307	Bpe-Chr2:16567527	Bpe13g00817	Bpe-Chr13:14475450	6.40E-59	dispersed
	Bpe02g01307	Bpe-Chr2:16567527	Bpe11g00067	Bpe-Chr11:458552	9.10E-15	transposed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	20962	PF03106	WRKY	1.30E-25	CL0274	Bpe	TF

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bpe02g01307	-		-	tcc:18601047	211.846