Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01341 TTGCAGAGACGAAGAAGAAAATCCATGGCGTCTTCGTCTAATTCCCCTTGTGCAGCCTGCAAGTTTCTCCGCCGGAAATGTCAACTGGAGTGCGTTTTCGCGCCGTACTTTCCACCAGACCAACCCCAAAAGTTCGCCAACGTCCACAAGGTGTTCGGCGCAAGCAACGTCACCAAGCTTCTCAACGAGCTCCATCCGCACCAGCGGGAAGACGCCGTCAACTCCCTTGCCTACGAGGCCGATATGCGTCTCAGAGATCCAGTCTATGGGTGCGTCGGCGTCATCTCCCTCCTCCAGCACCAGCTTCGCCAGCTTCAGATTGACCTCAGCTGCGCAAAATCTGAGCTCTCAAAATACCAAAACCTGGGTCTCGCCGGCCATGGCCTCATCGCAGCTGCCGCTGCAGCTGCCACTACGACTCATAACCACCATCTCCAGAACCTCGGAATCAACCTGATTGGCTCTGGGAAAGATTACCACCACCACCACCAGTTATTCCCTCGCGATCAGGCCCAGCCGATCATGAGGGGCTTCGACATTGCCGGAAACAGTGTCTACGACGGTGGCCTCCTAGCAATGAACGTCTCCGCAAGTTTAGGTCAACTCAGCCAGTTTCAGCAACCGAGGGCTGCCGGAGGCGATGATCACCGCCGAACAATCGATCCTTCTTAG 672 55.95 LQRRRRKSMASSSNSPCAACKFLRRKCQLECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQNLGLAGHGLIAAAAAAATTTHNHHLQNLGINLIGSGKDYHHHHQLFPRDQAQPIMRGFDIAGNSVYDGGLLAMNVSASLGQLSQFQQPRAAGGDDHRRTIDPS 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17034422 17035093 + Bpe009195.1 Bpe02g01341 99490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01341 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 189 - -
Bpe02g01341 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 10 189 - -
Bpe02g01341 223 Pfam Lateral organ boundaries (LOB) domain 16 113 IPR004883 -
Bpe02g01341 223 Coils Coil 95 122 - -
Bpe02g01341 223 ProSiteProfiles LOB domain profile. 15 116 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01341 Bpe-Chr2:17034422 Bpe13g00079 Bpe-Chr13:4520189 1.51E-59 dispersed
Bpe14g00045 Bpe-Chr14:687932 Bpe02g01341 Bpe-Chr2:17034422 7.31E-133 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20965 PF03195 LOB 3.30E-42 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01341 - - mesc:110628037 338.576