Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01352 ATGGTCCTCTCCAGAGCTGCATCTGAAAGCGATGTCTCCATCCACTCCACCTTCGCCTCCCGATACGTCAGAACTTCTCTTCCCAGGTACCGCATGCCGGAAAATTCAATCCCGAAGGAGGCGGCGTACCAGATAATCAACGACGAGCTGATGCTGGACGGAAATCCGAGGCTGAATCTGGCGTCGTTCGTGACGACGTGGATGGAGCCGGAGTGCGACAAGCTGATCATGTCCTCCATTAACAAGAACTACGTTGACATGGATGAATACCCGGTGACCACTGAGCTGCAGGCACGTCACTTGTCCTCCTCTTCATTTGACGCTTTTGCCAATCGATGTGTGAACATTATAGCTCACCTTTTCAATGCGCCGCTTGGAGAGTCAGAGACGGCGGTGGGCGTCGGAACGGTGGGGTCGTCGGAGGCCATCATGCTTGCCGGATTGGCTTTCAAGCGAAAATGGCAGAACAGAAGGAAAGCAGAGGGCAAACCCTGTGATAAGCCCAACATCGTCACCGGAGCTAATGTACAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGCTGAAGGAGGTGAAGCTGAGGGAAGGGTATTATGTGATGGACCCAAAGAAAGCGGTGGAGATGGTCGACGAGAACACCATCTGCGTCGCTGCAATTCTGGGTTCTACTCTCAACGGAGAATTCGAGGACGTCAAACTCTTGAACGATCTCTTGATCCGGAAAAACAAGCGAACTGGATGGGATACTCCTATTCACGTGGATGCTGCAAGCGGAGGGTTCATTGCTCCATTTCTTTACCCAGAGCTTGAGTGGGACTTCAGGCTGCCATTGGTGAAGAGCATTAACGTCAGTGGCCATAAATACGGACTCGTTTATGCCGGAATTGGATGGATTATTTGGAGAAGCAAAGAGGATTTGCCTGAAGAACTCATTTTCCATATCAACTATCTTGGAGCAGATCAACCAACTTTCACCCTCAACTTCTCCAAAGGTAGCAAAATTAGATTGACACTGATCAAAGGCTTGTTTCGAAAGCTGTTAATTTGTGGATATAGAAATGTCATGGAAAATTGCCGAGAAAACGCGATAGTGCTCAGAGAAGGACTGGAAAATACGGGACGTTTCACCATAGTCTCCAAAGATGACGGAGTCCCACTAGTTGCTTTCTCTCTCAAAGACAACAGCTGCCACAACGAGTTTGAAATCTCTGAAATGTTGAGGCGCTTTGGGTGGATAGTCCCGGCCTACACCATGCCAGCCGATGCACAACACATAACAGTGCTAAGGGTTGTAATACGCGAAGATTTTTCTCGCACACTCGCTGAACGCCTGGTCTTTGATATCGAAAAAGTTTTGCATGAACTCGACACCCTTCCGGCGCGAGTGGTTACGACTAAATTAGAAGCCACTAAATTAGGTGTCAGTAAGGAAACAGCCCCGGAGAGTGGGACTGTAACTGTGATCATTAAGAAGAGCAACGAGGAGGTCGAGAGGGAGGTGTCTACAATTTGGAAGAAGTTTGTGGCTAATAAGAAGAGGAAGAATGGTGTCTGCTAG 1566 48.79 MVLSRAASESDVSIHSTFASRYVRTSLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQARHLSSSSFDAFANRCVNIIAHLFNAPLGESETAVGVGTVGSSEAIMLAGLAFKRKWQNRRKAEGKPCDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPKKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLIRKNKRTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWIIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSKIRLTLIKGLFRKLLICGYRNVMENCRENAIVLREGLENTGRFTIVSKDDGVPLVAFSLKDNSCHNEFEISEMLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVFDIEKVLHELDTLPARVVTTKLEATKLGVSKETAPESGTVTVIIKKSNEEVEREVSTIWKKFVANKKRKNGVC 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17143152 17146515 + Bpe009207.1 Bpe02g01352 99501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01352 521 Gene3D - 66 374 IPR015421 GO:0003824
Bpe02g01352 521 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 395 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bpe02g01352 521 SUPERFAMILY PLP-dependent transferases 16 458 IPR015424 -
Bpe02g01352 521 PANTHER GLUTAMATE DECARBOXYLASE 1 521 - -
Bpe02g01352 521 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 458 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bpe02g01352 521 PANTHER GLUTAMATE DECARBOXYLASE 1 521 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bpe02g01352 521 Gene3D - 1 65 - -
Bpe02g01352 521 Gene3D - 375 462 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01352 Bpe-Chr2:17143152 Bpe05g00950 Bpe-Chr5:22429805 4.10E-11 dispersed
Bpe07g01075 Bpe-Chr7:16136351 Bpe02g01352 Bpe-Chr2:17143152 0 transposed
Bpe09g00716 Bpe-Chr9:15744910 Bpe02g01352 Bpe-Chr2:17143152 0 transposed
Bpe14g00065 Bpe-Chr14:1026114 Bpe02g01352 Bpe-Chr2:17143152 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01352 K01580 - pvy:116131519 848.195