Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01364 ATGGAGTTCGGGTTCTTCAGAGGACTGCCTGAGAATCTCTTTATTCTTGACATTGCTGGACAGATTACCTTTTTGCTCGACATCGTTCTTCAGTTCTTTGTTGCTTACCGAGACACTCAGACCTATATTATTGTTCACAAACGTACCCATATTGCTCTCCGGTACCTGAAATCTGGGTTTGTGATTGATCTTCTTGGATGCATGCCTTGGGACATCATCTACAAGGCTTGTGGGAGAAGAGAGGAAGTAAGGTATCTTTTATGGATCAGATTAAGTAGGGTGCGAAAAGTCACTGATTTCTTTCGGAATATGGAGAGGGACATACGTATAAACTACATGTTCACTAGGATTGTAAAGCTTATTGTTGTTGAGCTCTATTGCACACATACAGCTGCCTGCATCTTTTACTATTTGGCTACGACTCTTCCATCTTCTGAAGAAGGATACACCTGGATTGGAAGCTTAAAGTTGGGAGACTACAGTTACTCAAATTTCAGAGATATTGATATATGGAAACGCTACACAACATCCTTATATTTTGCCATAGTAACCATGGCCACAGTTGGTTATGGGGATATACATGCAGTTAATATGAGGGAAATGATATTTATAATGATATATGTCTCTTTTGACATGATTCTTGGGGCCTATTTGATTGGTAACATGACAGCCTTAATTGTTAAAGGTTCAAAAACTGAAAAGTTCAGAGATAAAATGGCAGATCTCATCAAATACATGAATCGAAACAGGCTTGGAAGAGACATCCGTAATCAGATTAAAGGTCACGTACGTTTACAGTACGAGAGTAGCTACACCGAGGCTTCTGTTCTTCAGGACATCCCCATTTCTATCCGCGCCAAGATTTCACAAACATTATACTTGCCTTACATTGAGAATGTTTCTCTCTTCAAGGGATGCTCAATCGAGTTCATCAATCAAATAGTTTTAAGACTCCACGAAGAGTTTTTTCTCCCTGGAGAAGTGATTATGGAACAGCGAAATGCCGTAGATCAACTTTATTTTATCTGTCATGGTAAATTGGAGGAACTGGGCATAGGAGAAGATGGATCAGAAGAAACTATTTCTGTACTAGAACCCAACAACTCATTCGGAGAGATTTCTATTCTTTGCAATATTCCTCAACCCTATACAGTTCGCGTCAGGGAATTATGTCGGCTTCTCAGGCTCGACAAGCAGTCTTTTACGAATATTCTTGATATATACTTTTACGATGGCCGGAAAATCTTGAACAATCTTCTAGAGGGAAAAGAATCTAGTCTCAGAGTCAAGCAGTTGGAGTCAGATATTACATTTCACATTGGAAAGCAAGAAGCAGAACTTGCTTTAAAGGTGAATAGTGCAGCTTACCATGGAGATTTGTTCCAGCTCAAAGGTTTGATCCGAGCAGGAGCCGATCCAAACAAGAAAGATTACGACGGAAGGTCACCATTGCACCTTGCAGCATCAAGAGGATATGAAGATATTGCACTTTTTCTCATTGAGGAAGGAGTAGACACCAACATAATAGATAAATTTGGAACTACACCTTTACTCGAAGCCATAAAAAACGGGCACGATCGAATTGTGGCTTTACTCGTCCAACGAGGTGCTTCTTTAAAGATAGAAGAAGCTGGGAACTTTCTTTGTGCAGCCGTTGCAAGGGGGGATTCTGATTTCCTTAAAAGAGTGTTAGCCAATGGAATAGATCCGAACTCGAAAGATTATGATTATCGAACTCCACTCCATGTGGCAGCTGCTGAAGGATTGCATCTGATGGCTAAGCTGCTGATAGAAGCTGGGGCCAGTGTCTTTTCAAAAGACAGATGGGGAAATACACCTCTAGATGAGGCCAGGAGGGTTGGAAACATGAATTTGATCAAACTATTGGAAGAAGCGAAGGCCTTTCAGCTCTCTGCATCATCCCCTCATCAAACCCAAGAAGTCACTGATAAGAAGAACTCAAGACAATGCACTGTGTTCCCTTTCCATCCTTGGGATCCCAAGGAATATAGAAGATCCGGGATTGTGTTATGGGTTCCACAAACCATTCAAGAGCTAATCGAAGCAGCCATCGAGCAGCTCGAACTTAAGAGTGGGACTTGTATATTAACAGAAGACGGAGGTAAAATTCTTGATGTTGACATGATTAGTGACGGGCAAAAGCTGTATCTAGGCAATGAAACAAATTAG 2190 41.05 MEFGFFRGLPENLFILDIAGQITFLLDIVLQFFVAYRDTQTYIIVHKRTHIALRYLKSGFVIDLLGCMPWDIIYKACGRREEVRYLLWIRLSRVRKVTDFFRNMERDIRINYMFTRIVKLIVVELYCTHTAACIFYYLATTLPSSEEGYTWIGSLKLGDYSYSNFRDIDIWKRYTTSLYFAIVTMATVGYGDIHAVNMREMIFIMIYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMADLIKYMNRNRLGRDIRNQIKGHVRLQYESSYTEASVLQDIPISIRAKISQTLYLPYIENVSLFKGCSIEFINQIVLRLHEEFFLPGEVIMEQRNAVDQLYFICHGKLEELGIGEDGSEETISVLEPNNSFGEISILCNIPQPYTVRVRELCRLLRLDKQSFTNILDIYFYDGRKILNNLLEGKESSLRVKQLESDITFHIGKQEAELALKVNSAAYHGDLFQLKGLIRAGADPNKKDYDGRSPLHLAASRGYEDIALFLIEEGVDTNIIDKFGTTPLLEAIKNGHDRIVALLVQRGASLKIEEAGNFLCAAVARGDSDFLKRVLANGIDPNSKDYDYRTPLHVAAAEGLHLMAKLLIEAGASVFSKDRWGNTPLDEARRVGNMNLIKLLEEAKAFQLSASSPHQTQEVTDKKNSRQCTVFPFHPWDPKEYRRSGIVLWVPQTIQELIEAAIEQLELKSGTCILTEDGGKILDVDMISDGQKLYLGNETN 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17229230 17233263 - Bpe009220.1 Bpe02g01364 99513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01364 729 Pfam Ion transport protein 12 227 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe02g01364 729 PRINTS Ankyrin repeat signature 480 495 IPR002110 GO:0005515
Bpe02g01364 729 PRINTS Ankyrin repeat signature 592 606 IPR002110 GO:0005515
Bpe02g01364 729 SMART ANK_2a 576 605 IPR002110 GO:0005515
Bpe02g01364 729 SMART ANK_2a 609 639 IPR002110 GO:0005515
Bpe02g01364 729 SMART ANK_2a 479 508 IPR002110 GO:0005515
Bpe02g01364 729 SMART ANK_2a 512 541 IPR002110 GO:0005515
Bpe02g01364 729 SMART ANK_2a 543 572 IPR002110 GO:0005515
Bpe02g01364 729 Gene3D Helix hairpin bin 229 285 - -
Bpe02g01364 729 Pfam KHA, dimerisation domain of potassium ion channel 656 724 IPR021789 -
Bpe02g01364 729 ProSiteProfiles Ankyrin repeat region circular profile. 576 608 - -
Bpe02g01364 729 Gene3D - 436 544 IPR036770 -
Bpe02g01364 729 ProSiteProfiles Ankyrin repeat profile. 576 608 IPR002110 GO:0005515
Bpe02g01364 729 ProSiteProfiles Ankyrin repeat region circular profile. 512 543 - -
Bpe02g01364 729 Gene3D - 3 228 - -
Bpe02g01364 729 Pfam Ankyrin repeats (3 copies) 454 541 IPR002110 GO:0005515
Bpe02g01364 729 Pfam Ankyrin repeats (3 copies) 549 630 IPR002110 GO:0005515
Bpe02g01364 729 Gene3D - 545 639 IPR036770 -
Bpe02g01364 729 SUPERFAMILY cAMP-binding domain-like 230 420 IPR018490 -
Bpe02g01364 729 ProSiteProfiles Ankyrin repeat region circular profile. 479 511 - -
Bpe02g01364 729 SMART cnmp_10 302 420 IPR000595 -
Bpe02g01364 729 ProSiteProfiles KHA domain profile. 656 729 IPR021789 -
Bpe02g01364 729 ProSiteProfiles Ankyrin repeat profile. 479 511 IPR002110 GO:0005515
Bpe02g01364 729 Gene3D Jelly Rolls 286 424 IPR014710 -
Bpe02g01364 729 PRINTS EAG/ELK/ERG potassium channel family signature 126 136 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe02g01364 729 PRINTS EAG/ELK/ERG potassium channel family signature 17 27 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe02g01364 729 PRINTS EAG/ELK/ERG potassium channel family signature 174 191 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe02g01364 729 PRINTS EAG/ELK/ERG potassium channel family signature 218 227 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe02g01364 729 SUPERFAMILY Voltage-gated potassium channels 8 227 - -
Bpe02g01364 729 SUPERFAMILY Ankyrin repeat 451 631 IPR036770 -
Bpe02g01364 729 PANTHER POTASSIUM CHANNEL AKT1 1 728 IPR045319 GO:0005249|GO:0006813
Bpe02g01364 729 ProSiteProfiles Ankyrin repeat profile. 512 544 IPR002110 GO:0005515
Bpe02g01364 729 CDD CAP_ED 302 416 IPR000595 -
Bpe02g01364 729 Pfam Cyclic nucleotide-binding domain 322 406 IPR000595 -
Bpe02g01364 729 ProSiteProfiles cAMP/cGMP binding motif profile. 302 422 IPR000595 -
Bpe02g01364 729 PANTHER POTASSIUM CHANNEL SKOR-LIKE 1 728 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01364 Bpe-Chr2:17229230 Bpe09g00719 Bpe-Chr9:15769287 0 dispersed
Bpe02g01364 Bpe-Chr2:17229230 Bpe01g00497 Bpe-Chr1:3177400 2.78E-126 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01364 K21867 - gmx:100797927 1212.98