Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01403 ATGCGGATGAGCTGCAATGGATGCAGAGTCCTGCGTAAAGGCTGCAGTGAAAATTGTAGTATTAGACCTTGCTTGCAGTGGATCAAGAGCCATGATTCTCAGGCCAACGCTACTGTTTTCCTCGCCAAGTTCTATGGCCGTGCTGGCCTCATGAACCTCATCAACGCCGGCCCTGATCACCTCCGCCCTGCTATTTTTAGGTCTTTGTTGTACGAGGCGTGTGGGAGGATTGTTAACCCGATTTATGGATCCGTCGGCTTGCTGTGGTCCGGAAGCTGGCAACTCTGCCAGGCCGCTGTTGAGGCCGTCCTGAAAGGAGCTCCGATCATTCCGATTACCTCTGAAGCAGCGGCTAACGGACATGGACCGCCGCTTAAGCCATACGACATCCGACACGTTGCCAAGGATGAGAACTCCATGGCGTCTGATCGACTCCGGCGAGTAAAGACTCGCAGTCGTCACAATCGATCCGTCGGAAAGCCGAAGTCGAGCAAGAATTCTCCGATCGATTGCCTGGTCAATCCGGCTGGCGCTGTCTTATCCGATGCGATGAACGGGTCCACGAGTCACGAATCGTCGCTGAGTCACCAGTCCGAGGCGCCGAACATTGAAAACGAGAGCAAGGAATCGGGGAGCATCGTCTCCATGGAGACTGGCGAGGCCTCGGCGCCGGCGATGATCGGATCAGAAACAGAATCCTTCCAGAAGCGTAGATACGAAGAAACCGAGGGAGGTGACATAGCCCTGGAGCTGACCTTAGGGCTGAAGCCGCCCCCGGTGTCACGTGCGGAGCAGGTGGTTCCTGTGAAGAAGCGAAAAGTCGACTCGAACAGTACATCGCTCATCGGCTCCTGTAAGGCCGAACTGGGCCTGGAATTTCCGGCATGA 888 55.74 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSHDSQANATVFLAKFYGRAGLMNLINAGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPIIPITSEAAANGHGPPLKPYDIRHVAKDENSMASDRLRRVKTRSRHNRSVGKPKSSKNSPIDCLVNPAGAVLSDAMNGSTSHESSLSHQSEAPNIENESKESGSIVSMETGEASAPAMIGSETESFQKRRYEETEGGDIALELTLGLKPPPVSRAEQVVPVKKRKVDSNSTSLIGSCKAELGLEFPA 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17537492 17538462 + Bpe009258.2 Bpe02g01403 99552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01403 295 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 292 - -
Bpe02g01403 295 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 292 - -
Bpe02g01403 295 PIRSF AS2 1 292 IPR017414 -
Bpe02g01403 295 MobiDBLite consensus disorder prediction 139 226 - -
Bpe02g01403 295 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Bpe02g01403 295 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Bpe02g01403 295 MobiDBLite consensus disorder prediction 181 217 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01403 Bpe-Chr2:17537492 Bpe13g00123 Bpe-Chr13:7812815 4.53E-54 dispersed
Bpe14g00112 Bpe-Chr14:1585846 Bpe02g01403 Bpe-Chr2:17537492 1.41E-162 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20971 PF03195 LOB 7.20E-24 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01403 - - zju:107416542 380.948