Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01414 ATGTCGCGTGTTGATTCTTCACGTGAGGAGAATGTGTACATGGCGAAGTTGTCCGAACAGGCCGAACGCTATGAGGAAATGGTTGAGTTTATGGAGAAAGTTGCAAAGACTGTGGATGTCGATGAGCTGACTGTAGAAGAAAGAAATCTTCTATCTGTGGCTTATAAAAATGTGATTGGTGCACGGAGGGCTTCATGGAGAATCATTTCTTCCATTGAGCAAAAGGAAGAGAGTAGGGGAAATGAGGATCATGTCGCAATCATCAAGGAATATCGAGGAAAGATAGAAAATGAACTTAGCAAGATCTGTGATGGGATTTTGAGCCTTCTTGAGTCACATCTCATCCCATCTGCAGCATCTGCCGAGTCTAAAGTTTTTTATCTCAAAATGAAGGGTGATTATCACAGGTATCTTGCCGAGTTTAAGACTGGGGCTGAGAGGAAGGAAGCTGCCGAAAGCACTTTGTTTGCTTACAAGTCTGCTCAGTTATTATCCTATTTAGAATTTTTTTACACATATGTTCATGTTTTTTTGTTACAGGACATTGCTCTCGCAGATCTTGCTCCTACTCATCCAATTAGGCTTGGACTTGCACTTAATTTTTCAGTATTTTATTATGAAATACTGAATTCACCAGATCGCGCTTGCAATCTTGCAAAGCAGGCCTTTGACGAGGCTATTGCTGAGTTGGATACGTTGGGTGAGGAGTCATACAAGGATAGTACATTGATCATGCAACTTCTCCGTGACAATTTGACTCTGTGGACCTCTGATATTACGGTCTCTCTCTCTCTCTCTCTCTAG 804 41.79 MSRVDSSREENVYMAKLSEQAERYEEMVEFMEKVAKTVDVDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKEYRGKIENELSKICDGILSLLESHLIPSAASAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLFAYKSAQLLSYLEFFYTYVHVFLLQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDITVSLSLSL 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17631978 17633392 - Bpe009269.2 Bpe02g01414 99563

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01414 267 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Bpe02g01414 267 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Bpe02g01414 267 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Bpe02g01414 267 Gene3D - 1 262 IPR036815 -
Bpe02g01414 267 Pfam 14-3-3 protein 14 164 IPR023410 -
Bpe02g01414 267 Pfam 14-3-3 protein 181 256 IPR023410 -
Bpe02g01414 267 ProSitePatterns 14-3-3 proteins signature 2. 238 257 IPR023409 -
Bpe02g01414 267 SMART 1433_4 8 267 IPR023410 -
Bpe02g01414 267 SUPERFAMILY 14-3-3 protein 7 258 IPR036815 -
Bpe02g01414 267 PANTHER 14-3-3-LIKE PROTEIN GF14-F 5 262 - -
Bpe02g01414 267 Coils Coil 14 34 - -
Bpe02g01414 267 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Bpe02g01414 267 PANTHER 14-3-3 PROTEIN 5 262 IPR000308 -
Bpe02g01414 267 PIRSF 14-3-3 2 175 IPR000308 -
Bpe02g01414 267 PIRSF 14-3-3 177 263 IPR000308 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01414 K06630 YWHAE; 14-3-3 protein epsilon - cit:102617582 442.195
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01414 Bpe-Chr2:17631978 Bpe14g00462 Bpe-Chr14:4169254 3.48E-151 dispersed
Bpe11g01215 Bpe-Chr11:9054707 Bpe02g01414 Bpe-Chr2:17631978 8.96E-159 transposed
Bpe14g00124 Bpe-Chr14:1692190 Bpe02g01414 Bpe-Chr2:17631978 6.33E-132 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe02g01128 BCT,CCT 4 242 14-3-3 family AT4G09000 90.8 2.6e-119 425.2
Bpe04g00439 CCT 5 242 14-3-3 family AT4G09000 86.1 9.5e-114 406.8
Bpe11g01215 . 6 249 14-3-3 family AT4G09000 82.8 4.9e-110 394.4
Bpe14g00462 BCT,CCT 1 284 14-3-3 family AT4G09000 75.4 1.1e-109 393.3
Bpe02g01414 . 6 264 14-3-3 family AT4G09000 79.2 4.1e-109 391.3
Bpe06g00098 . 4 250 14-3-3 family AT4G09000 72.9 4.6e-100 361.3
Bpe04g00424 . 11 263 14-3-3 family AT4G09000 72.3 5.6e-98 354.4
Bpe14g00635 . 4 238 14-3-3 family AT4G09000 68.8 2.8e-89 325.5
Bpe14g00124 . 4 214 14-3-3 family AT4G09000 78.2 6.4e-86 314.3
Bpe10g00051 . 10 207 14-3-3 family AT4G09000 72.2 6.4e-78 287.7
Bpe02g01128 BCT,CCT 6 260 14-3-3 family AT1G78300 91.1 2.6e-125 444.9
Bpe14g00462 BCT,CCT 7 302 14-3-3 family AT1G78300 77.5 4.8e-116 414.1
Bpe04g00439 CCT 5 254 14-3-3 family AT1G78300 85.2 4.8e-116 414.1
Bpe11g01215 . 6 244 14-3-3 family AT1G78300 86.2 8.8e-110 393.3
Bpe02g01414 . 6 259 14-3-3 family AT1G78300 82.3 1.5e-109 392.5
Bpe06g00098 . 11 246 14-3-3 family AT1G78300 75.0 1.8e-99 359.0
Bpe04g00424 . 11 258 14-3-3 family AT1G78300 73.8 2.7e-98 355.1
Bpe14g00635 . 7 244 14-3-3 family AT1G78300 69.6 1.6e-90 329.3
Bpe14g00124 . 6 214 14-3-3 family AT1G78300 79.9 4.0e-86 314.7
Bpe10g00051 . 11 207 14-3-3 family AT1G78300 72.1 4.0e-78 288.1
Bpe02g01414 . 6 262 14-3-3 family AT5G38480 84.8 4.7e-116 414.1
Bpe02g01128 BCT,CCT 5 257 14-3-3 family AT5G38480 85.0 3.1e-115 411.4
Bpe11g01215 . 6 246 14-3-3 family AT5G38480 88.4 7.6e-114 406.8
Bpe14g00462 BCT,CCT 7 299 14-3-3 family AT5G38480 74.7 5.1e-110 394.0
Bpe04g00439 CCT 6 255 14-3-3 family AT5G38480 80.0 4.3e-109 391.0
Bpe06g00098 . 10 247 14-3-3 family AT5G38480 73.1 8.4e-97 350.1
Bpe04g00424 . 10 260 14-3-3 family AT5G38480 72.1 3.2e-96 348.2
Bpe14g00124 . 6 214 14-3-3 family AT5G38480 86.1 4.3e-93 337.8
Bpe14g00635 . 7 244 14-3-3 family AT5G38480 72.5 1.8e-91 332.4
Bpe10g00051 . 10 207 14-3-3 family AT5G38480 70.7 2.2e-76 282.3
Bpe02g01128 BCT,CCT 3 242 14-3-3 family AT1G35160 91.3 4.8e-120 427.6
Bpe04g00439 CCT 4 242 14-3-3 family AT1G35160 86.2 1.1e-113 406.4
Bpe14g00462 BCT,CCT 4 284 14-3-3 family AT1G35160 76.9 4.1e-111 397.9
Bpe11g01215 . 6 243 14-3-3 family AT1G35160 85.3 1.7e-109 392.5
Bpe02g01414 . 6 258 14-3-3 family AT1G35160 80.6 1.5e-108 389.4
Bpe06g00098 . 1 252 14-3-3 family AT1G35160 72.2 4.2e-100 361.3
Bpe04g00424 . 1 258 14-3-3 family AT1G35160 70.9 4.4e-97 351.3
Bpe14g00635 . 2 237 14-3-3 family AT1G35160 70.2 5.2e-90 327.8
Bpe14g00124 . 3 214 14-3-3 family AT1G35160 79.8 3.1e-87 318.5
Bpe10g00051 . 11 207 14-3-3 family AT1G35160 72.1 1.0e-77 287.0
Bpe02g01128 BCT,CCT 6 255 14-3-3 family AT5G16050 80.0 5.9e-109 390.6
Bpe02g01414 . 5 259 14-3-3 family AT5G16050 78.8 2.1e-106 382.1
Bpe11g01215 . 5 244 14-3-3 family AT5G16050 82.5 8.0e-106 380.2
Bpe04g00439 CCT 4 255 14-3-3 family AT5G16050 76.2 9.8e-104 373.2
Bpe14g00462 BCT,CCT 4 297 14-3-3 family AT5G16050 68.4 6.3e-103 370.5
Bpe06g00098 . 10 245 14-3-3 family AT5G16050 69.5 4.3e-91 331.3
Bpe04g00424 . 10 257 14-3-3 family AT5G16050 67.7 2.0e-88 322.4
Bpe14g00124 . 4 214 14-3-3 family AT5G16050 79.1 1.6e-85 312.8
Bpe14g00635 . 1 244 14-3-3 family AT5G16050 65.0 1.3e-84 309.7
Bpe10g00051 . 10 207 14-3-3 family AT5G16050 66.7 3.8e-71 265.0
Bpe06g00098 . 6 246 14-3-3 family AT5G10450 85.9 4.8e-114 407.5
Bpe04g00424 . 9 260 14-3-3 family AT5G10450 82.9 9.9e-112 399.8
Bpe02g01128 BCT,CCT 1 251 14-3-3 family AT5G10450 77.8 4.3e-107 384.4
Bpe11g01215 . 7 244 14-3-3 family AT5G10450 78.7 3.2e-102 368.2
Bpe04g00439 CCT 7 242 14-3-3 family AT5G10450 76.8 1.8e-100 362.5
Bpe02g01414 . 7 259 14-3-3 family AT5G10450 72.4 5.7e-99 357.5
Bpe14g00462 BCT,CCT 4 293 14-3-3 family AT5G10450 65.6 8.2e-98 353.6
Bpe10g00051 . 9 207 14-3-3 family AT5G10450 85.4 1.8e-92 335.9
Bpe14g00635 . 1 238 14-3-3 family AT5G10450 66.4 3.2e-86 315.1
Bpe14g00124 . 4 214 14-3-3 family AT5G10450 70.8 9.4e-78 287.0
Bpe02g01414 . 4 259 14-3-3 family AT3G02520 85.5 1.2e-117 419.5
Bpe02g01128 BCT,CCT 6 259 14-3-3 family AT3G02520 85.1 2.6e-117 418.3
Bpe04g00439 CCT 5 259 14-3-3 family AT3G02520 82.4 2.2e-116 415.2
Bpe11g01215 . 4 244 14-3-3 family AT3G02520 88.0 2.5e-115 411.8
Bpe14g00462 BCT,CCT 7 301 14-3-3 family AT3G02520 74.0 1.9e-112 402.1
Bpe06g00098 . 10 245 14-3-3 family AT3G02520 75.4 2.5e-99 358.6
Bpe14g00124 . 6 214 14-3-3 family AT3G02520 87.6 5.7e-96 347.4
Bpe04g00424 . 10 257 14-3-3 family AT3G02520 72.2 9.7e-96 346.7
Bpe14g00635 . 4 243 14-3-3 family AT3G02520 71.1 6.5e-92 334.0
Bpe10g00051 . 10 207 14-3-3 family AT3G02520 74.2 1.3e-79 293.1
Bpe06g00098 . 6 247 14-3-3 family AT5G65430 85.5 1.1e-115 412.9
Bpe04g00424 . 9 259 14-3-3 family AT5G65430 83.3 1.9e-112 402.1
Bpe02g01128 BCT,CCT 1 242 14-3-3 family AT5G65430 79.8 1.3e-105 379.4
Bpe11g01215 . 7 256 14-3-3 family AT5G65430 75.7 1.4e-102 369.4
Bpe04g00439 CCT 4 242 14-3-3 family AT5G65430 76.7 3.4e-101 364.8
Bpe02g01414 . 7 261 14-3-3 family AT5G65430 73.0 6.4e-100 360.5
Bpe14g00462 BCT,CCT 9 284 14-3-3 family AT5G65430 67.9 3.9e-97 351.3
Bpe10g00051 . 9 207 14-3-3 family AT5G65430 85.9 1.5e-93 339.3
Bpe14g00635 . 1 238 14-3-3 family AT5G65430 68.5 1.6e-87 319.3
Bpe14g00124 . 7 214 14-3-3 family AT5G65430 71.8 3.1e-78 288.5
Bpe14g00635 . 1 244 14-3-3 family AT2G42590 82.0 7.7e-112 400.2
Bpe02g01128 BCT,CCT 8 244 14-3-3 family AT2G42590 70.9 3.7e-90 328.2
Bpe04g00439 CCT 8 255 14-3-3 family AT2G42590 67.6 2.9e-87 318.5
Bpe11g01215 . 8 245 14-3-3 family AT2G42590 70.6 6.6e-87 317.4
Bpe02g01414 . 8 260 14-3-3 family AT2G42590 68.8 2.5e-86 315.5
Bpe06g00098 . 11 245 14-3-3 family AT2G42590 66.4 5.2e-84 307.8
Bpe14g00462 BCT,CCT 9 290 14-3-3 family AT2G42590 60.3 7.5e-83 303.9
Bpe04g00424 . 11 257 14-3-3 family AT2G42590 63.2 6.0e-80 294.3
Bpe14g00124 . 8 214 14-3-3 family AT2G42590 66.7 4.4e-67 251.5
Bpe10g00051 . 11 207 14-3-3 family AT2G42590 64.0 9.2e-65 243.8
Bpe14g00635 . 6 243 14-3-3 family AT1G22300 76.9 1.7e-102 369.0
Bpe04g00439 CCT 8 246 14-3-3 family AT1G22300 70.3 1.7e-89 325.9
Bpe02g01128 BCT,CCT 8 246 14-3-3 family AT1G22300 69.0 3.2e-88 321.6
Bpe02g01414 . 4 259 14-3-3 family AT1G22300 66.7 6.0e-87 317.4
Bpe11g01215 . 4 244 14-3-3 family AT1G22300 68.9 8.6e-86 313.5
Bpe14g00462 BCT,CCT 9 288 14-3-3 family AT1G22300 59.6 2.6e-82 302.0
Bpe06g00098 . 11 245 14-3-3 family AT1G22300 64.7 2.7e-79 292.0
Bpe04g00424 . 11 257 14-3-3 family AT1G22300 62.2 5.6e-77 284.3
Bpe14g00124 . 5 214 14-3-3 family AT1G22300 65.6 4.8e-68 254.6
Bpe10g00051 . 11 207 14-3-3 family AT1G22300 61.9 1.3e-60 229.9
Bpe14g00635 . 11 242 14-3-3 family AT1G34760 81.5 2.1e-103 372.1
Bpe04g00439 CCT 8 245 14-3-3 family AT1G34760 70.2 7.1e-88 320.5
Bpe02g01128 BCT,CCT 12 243 14-3-3 family AT1G34760 71.1 9.2e-88 320.1
Bpe02g01414 . 4 259 14-3-3 family AT1G34760 66.8 1.9e-85 312.4
Bpe11g01215 . 4 244 14-3-3 family AT1G34760 70.1 3.3e-85 311.6
Bpe14g00462 BCT,CCT 13 287 14-3-3 family AT1G34760 61.1 1.4e-80 296.2
Bpe06g00098 . 15 248 14-3-3 family AT1G34760 65.0 9.3e-80 293.5
Bpe04g00424 . 11 258 14-3-3 family AT1G34760 61.3 4.8e-76 281.2
Bpe14g00124 . 5 214 14-3-3 family AT1G34760 66.2 5.3e-67 251.1
Bpe10g00051 . 15 207 14-3-3 family AT1G34760 63.2 9.6e-61 230.3
Bpe14g00635 . 5 244 14-3-3 family AT1G26480 80.4 6.6e-108 387.1
Bpe02g01128 BCT,CCT 8 256 14-3-3 family AT1G26480 71.3 4.3e-91 331.3
Bpe04g00439 CCT 8 259 14-3-3 family AT1G26480 67.9 6.8e-89 323.9
Bpe11g01215 . 5 244 14-3-3 family AT1G26480 71.7 2.9e-87 318.5
Bpe02g01414 . 5 259 14-3-3 family AT1G26480 69.0 8.3e-87 317.0
Bpe14g00462 BCT,CCT 9 292 14-3-3 family AT1G26480 62.1 2.5e-83 305.4
Bpe06g00098 . 11 245 14-3-3 family AT1G26480 66.4 5.6e-83 304.3
Bpe04g00424 . 11 257 14-3-3 family AT1G26480 63.6 1.1e-78 290.0
Bpe14g00124 . 4 214 14-3-3 family AT1G26480 65.9 1.2e-66 250.0
Bpe10g00051 . 11 207 14-3-3 family AT1G26480 63.5 2.2e-63 239.2
Bpe14g00635 . 6 236 14-3-3 family AT1G78220 51.7 9.1e-64 240.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000486 6 4 5 6 5 2 5 3 3 3 3 3 6 3 2 6 3 6 6 3 3 3 3 3 3 3 3 6 4 0 114
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g01414 Bpe_Chr02 FPKM 66.306877 76.651344 116.0355 108.748772 31.423101 37.284786 30.428986 167.190582 168.797577 151.715149